Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3276 to 3300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2155028
2155040
AGGCCG
12
-
2
GGCCTC
UKMR15_RS09295
2154435
2155505
+
Genic
-593
NZ_LR595896.1
2155164
2155176
ACGAGC
12
-
2
TGCTCG
UKMR15_RS09295
2154435
2155505
+
Genic
-729
NZ_LR595896.1
2155527
2155539
CCGCG
12
+
2
CGCCG
UKMR15_RS09295
2154435
2155505
+
Intergenic
-1092
NZ_LR595896.1
2155553
2155565
CCCGCG
12
+
2
CCCGCG
UKMR15_RS09295
2154435
2155505
+
Intergenic
-1118
NZ_LR595896.1
2156720
2156733
ACGCGT
13
+
2
GTACGC
UKMR15_RS09300
2155615
2157354
+
Genic
-1105
NZ_LR595896.1
2158037
2158051
AGGCGG
14
-
2
TCCGCC
UKMR15_RS09305
2157644
2158264
-
Genic
-393
NZ_LR595896.1
2158774
2158786
AGGCGC
12
+
2
GCGCAG
UKMR15_RS09310
2158472
2159587
+
Genic
-302
NZ_LR595896.1
2158826
2158839
AGCGCG
13
+
2
AGCGCG
UKMR15_RS09310
2158472
2159587
+
Genic
-354
NZ_LR595896.1
2158941
2158954
AGCGCG
13
-
2
GCTCGC
UKMR15_RS09310
2158472
2159587
+
Genic
-469
NZ_LR595896.1
2162554
2162567
CCGCGG
13
+
2
CGGCCG
UKMR15_RS09315
2159584
2162754
+
Genic
-2970
NZ_LR595896.1
2163414
2163426
AGCGCG
12
-
2
TCGCGC
UKMR15_RS09320
2162757
2164661
+
Genic
-657
NZ_LR595896.1
2163627
2163639
AGATGC
12
-
2
ATCTGC
UKMR15_RS09320
2162757
2164661
+
Genic
-870
NZ_LR595896.1
2163822
2163836
CCCGCG
14
-
2
CGGGCG
UKMR15_RS09320
2162757
2164661
+
Genic
-1065
NZ_LR595896.1
2165050
2165062
CCGCG
12
+
2
GCCGC
UKMR15_RS09325
2165134
2166165
+
Intergenic
72
NZ_LR595896.1
2166218
2166230
CCGCG
12
-
2
CGGCG
UKMR15_RS09325
2165134
2166165
+
Intergenic
-1084
NZ_LR595896.1
2166264
2166276
AAACGG
12
-
2
CCGTTT
UKMR15_RS09325
2165134
2166165
+
Intergenic
-1130
NZ_LR595896.1
2166713
2166726
AGCGCG
13
+
2
CGAGCG
UKMR15_RS09330
2166682
2167023
-
Genic
-31
NZ_LR595896.1
2167398
2167410
AGCGCG
12
+
2
AGCGCG
UKMR15_RS09335
2167527
2167751
-
Intergenic
117
NZ_LR595896.1
2167486
2167498
CCCGCG
12
+
2
CCGCGC
UKMR15_RS09335
2167527
2167751
-
Intergenic
29
NZ_LR595896.1
2168542
2168554
ACGGG
12
-
2
TCCCG
UKMR15_RS09345
2168638
2169993
-
Intergenic
84
NZ_LR595896.1
2169395
2169407
ACG
12
+
4
CGA
UKMR15_RS09345
2168638
2169993
-
Genic
-757
NZ_LR595896.1
2169461
2169473
ACGGGC
12
-
2
TGCCCG
UKMR15_RS09345
2168638
2169993
-
Genic
-823
NZ_LR595896.1
2170631
2170643
AGCGCG
12
-
2
CGCTCG
UKMR15_RS09350
2170253
2171137
+
Genic
-378
NZ_LR595896.1
2171008
2171021
ACGCG
13
+
2
CGCGA
UKMR15_RS09350
2170253
2171137
+
Genic
-755
NZ_LR595896.1
2171079
2171092
AGCCCG
13
+
2
GCCCGA
UKMR15_RS09350
2170253
2171137
+
Genic
-826