Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3251 to 3275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2133284
2133296
ACGCGC
12
+
2
CGCACG
UKMR15_RS09170
2132803
2133030
+
Intergenic
-481
NZ_LR595896.1
2134168
2134180
CCCGCG
12
+
2
CGCGCC
UKMR15_RS09175
2133665
2134105
-
Intergenic
-503
NZ_LR595896.1
2134728
2134740
AGCGCG
12
-
2
CTCGCG
UKMR15_RS09185
2134657
2134947
+
Genic
-71
NZ_LR595896.1
2135872
2135884
ACATCG
12
-
2
GTCGAT
corA
2134955
2135932
-
Genic
-917
NZ_LR595896.1
2136069
2136082
CCGCG
13
-
2
GCGGC
cydX
2136137
2136298
+
Intergenic
55
NZ_LR595896.1
2137967
2137979
CCG
12
-
4
GCG
UKMR15_RS09205
2137118
2138218
-
Genic
-849
NZ_LR595896.1
2140752
2140764
CCG
12
+
4
CGC
UKMR15_RS09220
2140168
2140629
-
Intergenic
-584
NZ_LR595896.1
2141634
2141646
CCG
12
-
4
GCG
UKMR15_RS09235
2142558
2143073
+
Intergenic
912
NZ_LR595896.1
2141881
2141893
CCGCG
12
-
2
GCGGC
UKMR15_RS09235
2142558
2143073
+
Intergenic
665
NZ_LR595896.1
2141997
2142010
ATCGCG
13
+
2
CGCGAT
UKMR15_RS09235
2142558
2143073
+
Intergenic
548
NZ_LR595896.1
2142586
2142598
AGCGCG
12
-
2
CGCGCT
UKMR15_RS09235
2142558
2143073
+
Genic
-28
NZ_LR595896.1
2142610
2142622
ACGCGC
12
+
2
CGCGCA
UKMR15_RS09235
2142558
2143073
+
Genic
-52
NZ_LR595896.1
2142660
2142674
CCGCGG
14
+
2
CGGCCG
UKMR15_RS09235
2142558
2143073
+
Genic
-102
NZ_LR595896.1
2143004
2143016
CG
12
+
6
GC
UKMR15_RS09235
2142558
2143073
+
Genic
-446
NZ_LR595896.1
2143092
2143114
CCCGCG
22
-
3
CGCGGG
UKMR15_RS09235
2142558
2143073
+
Intergenic
-534
NZ_LR595896.1
2144420
2144434
ACGCCG
14
+
2
ACGCCG
UKMR15_RS09240
2143607
2144632
-
Genic
-813
NZ_LR595896.1
2144655
2144668
CCG
13
-
4
GGC
UKMR15_RS09240
2143607
2144632
-
Intergenic
-1048
NZ_LR595896.1
2148172
2148184
CCGCGG
12
+
2
GCCGCG
UKMR15_RS09260
2146858
2147901
-
Intergenic
-1314
NZ_LR595896.1
2149038
2149050
AGCCCG
12
+
2
GCCCGA
UKMR15_RS09265
2148509
2149486
-
Genic
-529
NZ_LR595896.1
2149359
2149371
ACGCCG
12
-
2
CGTCGG
UKMR15_RS09265
2148509
2149486
-
Genic
-850
NZ_LR595896.1
2149418
2149430
CG
12
+
6
GC
UKMR15_RS09265
2148509
2149486
-
Genic
-909
NZ_LR595896.1
2149883
2149895
AGCCG
12
+
2
CGAGC
UKMR15_RS09270
2149491
2150768
-
Genic
-392
NZ_LR595896.1
2150491
2150503
ACGCGC
12
+
2
ACGCGC
UKMR15_RS09270
2149491
2150768
-
Genic
-1000
NZ_LR595896.1
2151434
2151446
ACCTGC
12
-
2
CAGGTG
UKMR15_RS09275
2150853
2151842
-
Genic
-581
NZ_LR595896.1
2151794
2151806
ATCGCC
12
+
2
CATCGC
UKMR15_RS09275
2150853
2151842
-
Genic
-941