Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3201 to 3225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2092377
2092390
ACGTCG
13
+
2
CGTCGA
UKMR15_RS08995
2089294
2092923
-
Genic
-3083
NZ_LR595896.1
2094404
2094417
ATCGGC
13
-
2
ATGCCG
UKMR15_RS09000
2094104
2095075
-
Genic
-300
NZ_LR595896.1
2094918
2094930
ACCGCG
12
+
2
CCGCGA
UKMR15_RS09000
2094104
2095075
-
Genic
-814
NZ_LR595896.1
2096110
2096122
AGCGCC
12
-
2
GGCGCT
UKMR15_RS09000
2094104
2095075
-
Intergenic
-2006
NZ_LR595896.1
2098191
2098204
AACGGC
13
-
2
TTGCCG
UKMR15_RS09010
2097624
2098394
-
Genic
-567
NZ_LR595896.1
2099203
2099215
AATGGC
12
-
2
CATTGC
UKMR15_RS09015
2098493
2099023
-
Intergenic
-710
NZ_LR595896.1
2099220
2099232
ACGCGG
12
+
2
GGACGC
UKMR15_RS09015
2098493
2099023
-
Intergenic
-727
NZ_LR595896.1
2100951
2100963
AGCGCG
12
-
2
TCGCGC
UKMR15_RS09030
2101230
2102318
+
Intergenic
267
NZ_LR595896.1
2103829
2103841
AACCGG
12
-
2
CGGTTC
UKMR15_RS09040
2104027
2105199
-
Intergenic
186
NZ_LR595896.1
2105405
2105419
CCGCG
14
-
2
CGCGG
UKMR15_RS09045
2105575
2106093
-
Intergenic
156
NZ_LR595896.1
2105529
2105550
CCGCG
21
-
4
GCGCG
UKMR15_RS09045
2105575
2106093
-
Intergenic
25
NZ_LR595896.1
2105769
2105781
AACGGG
12
-
2
CGTTCC
UKMR15_RS09045
2105575
2106093
-
Genic
-194
NZ_LR595896.1
2106360
2106374
ACGTCG
14
+
2
ACGTCG
UKMR15_RS09050
2106141
2106839
+
Genic
-219
NZ_LR595896.1
2107658
2107670
ACGCCG
12
-
2
GCGTCG
UKMR15_RS09060
2106977
2108419
+
Genic
-681
NZ_LR595896.1
2108172
2108184
ACGCCG
12
+
2
CGCCGA
UKMR15_RS09060
2106977
2108419
+
Genic
-1195
NZ_LR595896.1
2111515
2111527
ACCGCG
12
-
2
GTCGCG
UKMR15_RS09075
2110844
2111893
+
Genic
-671
NZ_LR595896.1
2112065
2112087
ATCGCC
22
+
3
CGCCAT
UKMR15_RS09080
2111934
2112242
-
Genic
-131
NZ_LR595896.1
2113421
2113433
CCG
12
+
4
CGC
UKMR15_RS09090
2114188
2114598
-
Intergenic
755
NZ_LR595896.1
2113570
2113582
ACG
12
+
4
CGA
UKMR15_RS09090
2114188
2114598
-
Intergenic
606
NZ_LR595896.1
2113823
2113836
ACCGCG
13
+
2
GACCGC
UKMR15_RS09090
2114188
2114598
-
Intergenic
352
NZ_LR595896.1
2114337
2114349
CCGCGG
12
+
2
CGCGGC
UKMR15_RS09090
2114188
2114598
-
Genic
-149
NZ_LR595896.1
2115796
2115808
AGCGCG
12
+
2
GCGCGA
UKMR15_RS09095
2114793
2116382
-
Genic
-1003
NZ_LR595896.1
2116152
2116164
ACGCCG
12
-
2
TCGGCG
UKMR15_RS09095
2114793
2116382
-
Genic
-1359
NZ_LR595896.1
2116250
2116262
AACGGG
12
-
2
CCGTTC
UKMR15_RS09095
2114793
2116382
-
Genic
-1457
NZ_LR595896.1
2116462
2116475
CCGCG
13
-
2
CGGCG
UKMR15_RS09095
2114793
2116382
-
Intergenic
-1669