Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3301 to 3325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2172092
2172104
ATCGGC
12
-
2
GCCGAT
UKMR15_RS09355
2171188
2172858
+
Genic
-904
NZ_LR595896.1
2172634
2172646
ACGGCT
12
+
2
ACGGCT
UKMR15_RS09355
2171188
2172858
+
Genic
-1446
NZ_LR595896.1
2172949
2172961
CCCGCG
12
-
2
CGGGCG
UKMR15_RS09360
2172898
2173704
+
Genic
-51
NZ_LR595896.1
2173035
2173048
ACCGCG
13
-
2
GTCGCG
UKMR15_RS09360
2172898
2173704
+
Genic
-137
NZ_LR595896.1
2173390
2173402
ACGCCG
12
-
2
TCGGCG
UKMR15_RS09360
2172898
2173704
+
Genic
-492
NZ_LR595896.1
2173945
2173957
CCG
12
+
4
CGC
UKMR15_RS09365
2173959
2174777
-
Intergenic
2
NZ_LR595896.1
2174417
2174430
AGC
13
+
4
CAG
UKMR15_RS09365
2173959
2174777
-
Genic
-458
NZ_LR595896.1
2175548
2175560
AGCTGC
12
+
2
AGCTGC
UKMR15_RS09370
2174774
2175703
-
Genic
-774
NZ_LR595896.1
2176315
2176327
AGC
12
+
4
AGC
potA
2175700
2176860
-
Genic
-615
NZ_LR595896.1
2176349
2176361
AGCGCG
12
+
2
GCGCGA
potA
2175700
2176860
-
Genic
-649
NZ_LR595896.1
2178599
2178611
ACGGCT
12
+
2
GGCTAC
UKMR15_RS09385
2178432
2179739
+
Genic
-167
NZ_LR595896.1
2178975
2178987
AGCGCG
12
-
2
TCGCGC
UKMR15_RS09385
2178432
2179739
+
Genic
-543
NZ_LR595896.1
2179788
2179800
AACGC
12
+
2
CGCAA
UKMR15_RS09385
2178432
2179739
+
Intergenic
-1356
NZ_LR595896.1
2180490
2180504
ACGCCG
14
+
2
CCGACG
UKMR15_RS09395
2180478
2181122
-
Genic
-12
NZ_LR595896.1
2180663
2180675
ATCCCG
12
+
2
GATCCC
UKMR15_RS09395
2180478
2181122
-
Genic
-185
NZ_LR595896.1
2180796
2180808
ACGCCG
12
+
2
ACGCCG
UKMR15_RS09395
2180478
2181122
-
Genic
-318
NZ_LR595896.1
2181576
2181588
AACGCG
12
-
2
TTCGCG
UKMR15_RS09400
2181195
2182385
-
Genic
-381
NZ_LR595896.1
2181731
2181744
AGCGCG
13
-
2
GCGCTC
UKMR15_RS09400
2181195
2182385
-
Genic
-536
NZ_LR595896.1
2182468
2182480
ATGCGC
12
+
2
CGCATG
UKMR15_RS09400
2181195
2182385
-
Intergenic
-1273
NZ_LR595896.1
2183070
2183082
ACGCG
12
-
2
CGCGT
UKMR15_RS09405
2182584
2184020
-
Genic
-486
NZ_LR595896.1
2185298
2185311
ACATGG
13
-
2
TCCATG
UKMR15_RS09415
2185118
2186710
-
Genic
-180
NZ_LR595896.1
2185828
2185841
AAGATC
13
-
2
GATCTT
UKMR15_RS09415
2185118
2186710
-
Genic
-710
NZ_LR595896.1
2186277
2186292
ATCGGC
15
-
2
CGATGC
UKMR15_RS09415
2185118
2186710
-
Genic
-1159
NZ_LR595896.1
2187467
2187480
ACATCG
13
-
2
GTCGAT
UKMR15_RS09425
2187168
2189660
-
Genic
-299
NZ_LR595896.1
2187835
2187847
CCGCG
12
-
2
GCGGC
UKMR15_RS09425
2187168
2189660
-
Genic
-667