Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3351 to 3375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2202487
2202501
ATCGCG
14
+
2
CGATCG
UKMR15_RS09485
2202348
2203529
-
Genic
-139
NZ_LR595896.1
2202591
2202603
ACCTCG
12
-
2
AGGTCG
UKMR15_RS09485
2202348
2203529
-
Genic
-243
NZ_LR595896.1
2202653
2202665
ATGCCC
12
+
2
GCCCAT
UKMR15_RS09485
2202348
2203529
-
Genic
-305
NZ_LR595896.1
2203843
2203856
AAGCGC
13
-
2
TGCGCT
phaC
2203626
2205440
-
Genic
-217
NZ_LR595896.1
2205340
2205362
ACGGCG
22
+
3
ACGGCG
phaC
2203626
2205440
-
Genic
-1714
NZ_LR595896.1
2205625
2205637
CCGG
12
+
3
CCGG
phaC
2203626
2205440
-
Intergenic
-1999
NZ_LR595896.1
2206022
2206035
AGCGCG
13
-
2
GCGCTC
pgeF
2205957
2206793
-
Genic
-65
NZ_LR595896.1
2207458
2207470
ATCCGC
12
+
2
CCGCAT
UKMR15_RS09500
2206800
2207969
-
Genic
-658
NZ_LR595896.1
2207548
2207560
ACG
12
+
4
CGA
UKMR15_RS09500
2206800
2207969
-
Genic
-748
NZ_LR595896.1
2207789
2207803
AGCGCG
14
+
2
CGCGAG
UKMR15_RS09500
2206800
2207969
-
Genic
-989
NZ_LR595896.1
2209211
2209223
CCCCG
12
+
2
CCGCC
UKMR15_RS09510
2209041
2211290
-
Genic
-170
NZ_LR595896.1
2210884
2210902
ACCGGC
18
-
3
TGCCGG
UKMR15_RS09510
2209041
2211290
-
Genic
-1843
NZ_LR595896.1
2210950
2210962
CCGCG
12
-
2
GCGGC
UKMR15_RS09510
2209041
2211290
-
Genic
-1909
NZ_LR595896.1
2211325
2211337
CCGGCG
12
+
2
CGGCGC
UKMR15_RS09515
2211353
2211568
-
Intergenic
16
NZ_LR595896.1
2211993
2212007
AGGCGC
14
-
2
GCGCCT
UKMR15_RS09520
2211677
2212426
-
Genic
-316
NZ_LR595896.1
2213242
2213254
AGCGCG
12
-
2
CGCGCT
UKMR15_RS09525
2212566
2214890
+
Genic
-676
NZ_LR595896.1
2213291
2213303
AGGCCG
12
-
2
CTCGGC
UKMR15_RS09525
2212566
2214890
+
Genic
-725
NZ_LR595896.1
2214683
2214695
AAGGTG
12
+
2
AAGGTG
UKMR15_RS09525
2212566
2214890
+
Genic
-2117
NZ_LR595896.1
2214950
2214962
ACGCCG
12
-
2
CGGCGT
UKMR15_RS09530
2214877
2215071
-
Genic
-73
NZ_LR595896.1
2215818
2215831
AACTGG
13
-
2
GTTCCA
UKMR15_RS09535
2215126
2217018
-
Genic
-692
NZ_LR595896.1
2216194
2216206
AGC
12
+
4
AGC
UKMR15_RS09535
2215126
2217018
-
Genic
-1068
NZ_LR595896.1
2216323
2216336
ACGAGC
13
+
2
AGCACG
UKMR15_RS09535
2215126
2217018
-
Genic
-1197
NZ_LR595896.1
2216509
2216523
ACGGC
14
-
2
GCCGT
UKMR15_RS09535
2215126
2217018
-
Genic
-1383
NZ_LR595896.1
2217791
2217803
AGCGCG
12
+
2
GCGAGC
UKMR15_RS09545
2217311
2217904
-
Genic
-480
NZ_LR595896.1
2218118
2218130
CCGCG
12
+
2
GCCGC
UKMR15_RS09550
2217911
2219257
-
Genic
-207