Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3376 to 3400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2218467
2218480
CCCGCG
13
+
2
CGCCCG
UKMR15_RS09550
2217911
2219257
-
Genic
-556
NZ_LR595896.1
2218476
2218489
CCG
13
+
4
CCG
UKMR15_RS09550
2217911
2219257
-
Genic
-565
NZ_LR595896.1
2219174
2219187
AAAGGC
13
-
2
TTGCCT
UKMR15_RS09550
2217911
2219257
-
Genic
-1263
NZ_LR595896.1
2219207
2219219
ACG
12
+
4
ACG
UKMR15_RS09550
2217911
2219257
-
Genic
-1296
NZ_LR595896.1
2219367
2219380
CCGCG
13
-
2
GCGGC
UKMR15_RS09555
2219382
2220530
-
Intergenic
2
NZ_LR595896.1
2220344
2220356
AGGCGC
12
+
2
GCGCAG
UKMR15_RS09555
2219382
2220530
-
Genic
-962
NZ_LR595896.1
2221059
2221072
AGGGCG
13
-
2
TCGCCC
UKMR15_RS09565
2220858
2221757
-
Genic
-201
NZ_LR595896.1
2221126
2221138
AGGCGG
12
-
2
CCGCCT
UKMR15_RS09565
2220858
2221757
-
Genic
-268
NZ_LR595896.1
2221715
2221727
ACGATG
12
+
2
GACGAT
UKMR15_RS09565
2220858
2221757
-
Genic
-857
NZ_LR595896.1
2221815
2221827
AGCGCG
12
+
2
GCGCGA
hflK
2221774
2223102
-
Genic
-41
NZ_LR595896.1
2222571
2222584
ACCCG
13
+
2
CGACC
hflK
2221774
2223102
-
Genic
-797
NZ_LR595896.1
2222871
2222885
ACGCCG
14
+
2
GCCGAC
hflK
2221774
2223102
-
Genic
-1097
NZ_LR595896.1
2223242
2223254
CCGCG
12
-
2
GCGGC
hflX
2223184
2224347
-
Genic
-58
NZ_LR595896.1
2225676
2225688
ACGGCG
12
-
2
CGCCGT
der
2224793
2226130
-
Genic
-883
NZ_LR595896.1
2227822
2227836
AGGCG
14
+
2
GCGAG
UKMR15_RS09595
2227596
2228225
-
Genic
-226
NZ_LR595896.1
2228114
2228126
CCGCGG
12
+
2
CGCGGC
UKMR15_RS09595
2227596
2228225
-
Genic
-518
NZ_LR595896.1
2228496
2228508
CCCGCG
12
+
2
CGCGCC
hisS
2228278
2229618
-
Genic
-218
NZ_LR595896.1
2229169
2229183
ACGCGG
14
-
2
TCCGCG
hisS
2228278
2229618
-
Genic
-891
NZ_LR595896.1
2230280
2230293
AGGCCG
13
+
2
GGCCGA
ispG
2229637
2230941
-
Genic
-643
NZ_LR595896.1
2230799
2230811
CCGCG
12
+
2
GCGCC
ispG
2229637
2230941
-
Genic
-1162
NZ_LR595896.1
2231565
2231577
ACGCGC
12
-
2
TGCGCG
UKMR15_RS09610
2231031
2232041
-
Genic
-534
NZ_LR595896.1
2232108
2232123
AGGATG
15
-
2
CTCATC
UKMR15_RS09610
2231031
2232041
-
Intergenic
-1077
NZ_LR595896.1
2232869
2232881
ATGCCC
12
+
2
GCCCAT
rlmN
2232261
2233397
-
Genic
-608
NZ_LR595896.1
2233122
2233134
AACGGC
12
-
2
TTGCCG
rlmN
2232261
2233397
-
Genic
-861
NZ_LR595896.1
2233358
2233370
ACCTCG
12
-
2
GTCGAG
rlmN
2232261
2233397
-
Genic
-1097