Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3401 to 3425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2235836
2235849
AGCGAT
13
+
2
CGATAG
rlmD
2234885
2236282
-
Genic
-951
NZ_LR595896.1
2236607
2236619
CCGCG
12
+
2
CGCGC
UKMR15_RS09635
2236360
2237220
+
Genic
-247
NZ_LR595896.1
2237379
2237395
ATCGC
16
+
3
CGCAT
UKMR15_RS09640
2237394
2238170
-
Genic
-1
NZ_LR595896.1
2238075
2238087
ACGCCG
12
-
2
TCGGCG
UKMR15_RS09640
2237394
2238170
-
Genic
-681
NZ_LR595896.1
2238476
2238489
AGATCG
13
+
2
GATCGA
rpoS
2238178
2239257
-
Genic
-298
NZ_LR595896.1
2239153
2239165
ACGAGG
12
-
2
TCGTCC
rpoS
2238178
2239257
-
Genic
-975
NZ_LR595896.1
2240807
2240819
AGCGCG
12
+
2
AGCGCG
UKMR15_RS09655
2240171
2241139
-
Genic
-636
NZ_LR595896.1
2241099
2241111
AGCGCG
12
+
2
CGAGCG
UKMR15_RS09655
2240171
2241139
-
Genic
-928
NZ_LR595896.1
2243256
2243268
CCGGCG
12
+
2
CGGCGC
recR
2243277
2243879
-
Intergenic
9
NZ_LR595896.1
2243933
2243946
AGCGGC
13
+
2
GCGGCA
UKMR15_RS09675
2243911
2244237
-
Genic
-22
NZ_LR595896.1
2244621
2244633
ACCGGC
12
+
2
CGGCAC
UKMR15_RS09675
2243911
2244237
-
Intergenic
-710
NZ_LR595896.1
2245096
2245110
CCGGCG
14
+
2
CGGCGC
UKMR15_RS09675
2243911
2244237
-
Intergenic
-1185
NZ_LR595896.1
2248897
2248909
CCGCG
12
-
2
CGGCG
rho
2247996
2249258
+
Genic
-901
NZ_LR595896.1
2249846
2249858
CCGCG
12
+
2
GCGCC
UKMR15_RS09700
2249395
2249895
+
Genic
-451
NZ_LR595896.1
2249858
2249871
CG
13
+
6
CG
UKMR15_RS09700
2249395
2249895
+
Genic
-463
NZ_LR595896.1
2250003
2250015
AACGAG
12
-
2
CGTTCT
UKMR15_RS09705
2249892
2251448
+
Genic
-111
NZ_LR595896.1
2250540
2250552
AGCGCG
12
-
2
TCGCGC
UKMR15_RS09705
2249892
2251448
+
Genic
-648
NZ_LR595896.1
2251302
2251314
ACGCGC
12
+
2
ACGCGC
UKMR15_RS09705
2249892
2251448
+
Genic
-1410
NZ_LR595896.1
2251309
2251323
AGCGCG
14
-
2
CGCGCT
UKMR15_RS09705
2249892
2251448
+
Genic
-1417
NZ_LR595896.1
2253438
2253450
AGCCCG
12
+
2
CGAGCC
UKMR15_RS09720
2253038
2254786
+
Genic
-400
NZ_LR595896.1
2253678
2253692
AGCGCG
14
-
2
CGCGCT
UKMR15_RS09720
2253038
2254786
+
Genic
-640
NZ_LR595896.1
2253763
2253775
ACGGCC
12
-
2
GCCGTG
UKMR15_RS09720
2253038
2254786
+
Genic
-725
NZ_LR595896.1
2254070
2254082
AGC
12
-
4
TGC
UKMR15_RS09720
2253038
2254786
+
Genic
-1032
NZ_LR595896.1
2254917
2254929
AGCCCG
12
-
2
GCTCGG
UKMR15_RS09725
2254790
2256145
+
Genic
-127
NZ_LR595896.1
2255827
2255839
CCGCGG
12
+
2
GCCGCG
UKMR15_RS09725
2254790
2256145
+
Genic
-1037