Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3451 to 3475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2272423
2272435
ACGC
12
+
3
ACGC
UKMR15_RS09800
2271268
2272974
+
Genic
-1155
NZ_LR595896.1
2272525
2272537
CCGCGG
12
+
2
GCCGCG
UKMR15_RS09800
2271268
2272974
+
Genic
-1257
NZ_LR595896.1
2272859
2272871
AGCGCG
12
-
2
CGCGCT
UKMR15_RS09800
2271268
2272974
+
Genic
-1591
NZ_LR595896.1
2273316
2273330
ATCGGC
14
+
2
TCGGCA
UKMR15_RS09805
2272995
2273366
+
Genic
-321
NZ_LR595896.1
2273366
2273378
CCCGCG
12
+
2
CGCCCG
UKMR15_RS09805
2272995
2273366
+
Genic
-371
NZ_LR595896.1
2274094
2274106
AGGCCG
12
+
2
CGAGGC
UKMR15_RS09810
2273493
2274644
+
Genic
-601
NZ_LR595896.1
2275390
2275402
AGCCG
12
-
2
GCTCG
UKMR15_RS09815
2274651
2275658
+
Genic
-739
NZ_LR595896.1
2276385
2276397
CG
12
+
6
CG
UKMR15_RS09820
2275655
2276602
+
Genic
-730
NZ_LR595896.1
2276830
2276842
ATCGCG
12
+
2
TCGCGA
UKMR15_RS09825
2276599
2277654
+
Genic
-231
NZ_LR595896.1
2279794
2279808
CCGCG
14
+
2
CGCCG
UKMR15_RS09845
2279607
2281241
+
Genic
-187
NZ_LR595896.1
2280681
2280693
ACCGGC
12
+
2
CCGGCA
UKMR15_RS09845
2279607
2281241
+
Genic
-1074
NZ_LR595896.1
2282532
2282544
CCG
12
+
4
GCC
UKMR15_RS09850
2281481
2282695
+
Genic
-1051
NZ_LR595896.1
2283507
2283520
AAGATG
13
+
2
AGATGA
UKMR15_RS09855
2282930
2283940
-
Genic
-577
NZ_LR595896.1
2283890
2283902
ACGAGC
12
+
2
ACGAGC
UKMR15_RS09855
2282930
2283940
-
Genic
-960
NZ_LR595896.1
2284665
2284677
ACGGCG
12
+
2
CGACGG
UKMR15_RS09865
2284716
2286098
-
Intergenic
39
NZ_LR595896.1
2286136
2286148
ATCGGC
12
+
2
TCGGCA
UKMR15_RS09865
2284716
2286098
-
Intergenic
-1420
NZ_LR595896.1
2286627
2286640
AAGGTC
13
-
2
CCTTGA
UKMR15_RS09870
2286242
2286694
-
Genic
-385
NZ_LR595896.1
2287126
2287138
AGGCG
12
-
2
CTCGC
priB
2287000
2287299
-
Genic
-126
NZ_LR595896.1
2287468
2287480
AACTTG
12
+
2
TTGAAC
rpsF
2287336
2287710
-
Genic
-132
NZ_LR595896.1
2288146
2288158
ACCGCT
12
-
2
CGGTAG
UKMR15_RS09890
2287945
2289084
-
Genic
-201
NZ_LR595896.1
2288405
2288418
CCGCGG
13
+
2
CGGCCG
UKMR15_RS09890
2287945
2289084
-
Genic
-460
NZ_LR595896.1
2288472
2288489
CCCCGG
17
+
2
CGGCCC
UKMR15_RS09890
2287945
2289084
-
Genic
-527
NZ_LR595896.1
2288959
2288971
AGCGCG
12
-
2
CGCTCG
UKMR15_RS09890
2287945
2289084
-
Genic
-1014
NZ_LR595896.1
2289659
2289671
AGCGCG
12
+
2
AGCGCG
UKMR15_RS09895
2289074
2289781
-
Genic
-585
NZ_LR595896.1
2290041
2290053
CCG
12
-
4
GCG
UKMR15_RS09900
2289987
2290907
+
Genic
-54