Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3476 to 3500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2290446
2290458
ACG
12
-
4
TCG
UKMR15_RS09900
2289987
2290907
+
Genic
-459
NZ_LR595896.1
2290886
2290899
AACCGC
13
+
2
CAACCG
UKMR15_RS09900
2289987
2290907
+
Genic
-899
NZ_LR595896.1
2291113
2291125
ATCCG
12
-
2
CGGAT
UKMR15_RS09905
2290918
2291343
+
Genic
-195
NZ_LR595896.1
2291846
2291860
AGCCCG
14
+
2
CCGAGC
UKMR15_RS09910
2291648
2292559
-
Genic
-198
NZ_LR595896.1
2292750
2292764
ACGAGC
14
-
2
CGTGCT
gcl
2292722
2294497
+
Genic
-28
NZ_LR595896.1
2293001
2293013
ATCCCG
12
+
2
CGATCC
gcl
2292722
2294497
+
Genic
-279
NZ_LR595896.1
2293544
2293556
ATCGGC
12
+
2
TCGGCA
gcl
2292722
2294497
+
Genic
-822
NZ_LR595896.1
2293781
2293793
AAGCGC
12
+
2
AGCGCA
gcl
2292722
2294497
+
Genic
-1059
NZ_LR595896.1
2294254
2294267
ACGGCG
13
-
2
GTCGCC
gcl
2292722
2294497
+
Genic
-1532
NZ_LR595896.1
2295022
2295034
AGGCGC
12
-
2
GCCTGC
hyi
2294614
2295402
+
Genic
-408
NZ_LR595896.1
2295877
2295890
ACGCG
13
+
2
CGCGA
UKMR15_RS09925
2295500
2296405
+
Genic
-377
NZ_LR595896.1
2296631
2296645
AGCGCG
14
+
2
CGCGAG
UKMR15_RS09925
2295500
2296405
+
Intergenic
-1131
NZ_LR595896.1
2298058
2298070
ACGGGC
12
-
2
TGCCCG
UKMR15_RS09940
2297811
2298854
-
Genic
-247
NZ_LR595896.1
2298145
2298157
ACCTCG
12
+
2
CGACCT
UKMR15_RS09940
2297811
2298854
-
Genic
-334
NZ_LR595896.1
2298914
2298929
AGCGCG
15
-
2
CGCTCG
UKMR15_RS09940
2297811
2298854
-
Intergenic
-1103
NZ_LR595896.1
2301334
2301347
CCGCG
13
+
2
CGCGC
UKMR15_RS09960
2301361
2302425
-
Intergenic
14
NZ_LR595896.1
2301819
2301831
ATCCGC
12
-
2
GATGCG
UKMR15_RS09960
2301361
2302425
-
Genic
-458
NZ_LR595896.1
2302007
2302021
AGATCG
14
+
2
TCGAGA
UKMR15_RS09960
2301361
2302425
-
Genic
-646
NZ_LR595896.1
2304226
2304239
CCGCG
13
-
2
GCGGC
UKMR15_RS09970
2304241
2305428
-
Intergenic
2
NZ_LR595896.1
2305328
2305340
ACCGCG
12
+
2
CCGCGA
UKMR15_RS09970
2304241
2305428
-
Genic
-1087
NZ_LR595896.1
2305522
2305534
AGCCCG
12
+
2
CCGAGC
UKMR15_RS09975
2305495
2305848
-
Genic
-27
NZ_LR595896.1
2306575
2306597
AGCGCG
22
+
3
CGCGAG
UKMR15_RS09980
2305922
2306650
-
Genic
-653
NZ_LR595896.1
2308341
2308354
ACGGGC
13
+
2
ACGGGC
UKMR15_RS09995
2308095
2309129
-
Genic
-246
NZ_LR595896.1
2308451
2308463
AGCGCG
12
+
2
CGCGAG
UKMR15_RS09995
2308095
2309129
-
Genic
-356
NZ_LR595896.1
2308831
2308845
ACGCCG
14
-
2
CGTCGG
UKMR15_RS09995
2308095
2309129
-
Genic
-736