Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3501 to 3525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
2309320
2309334
CCGCG
14
+
2
GCGCC
UKMR15_RS10000
2309149
2309769
-
Genic
-171
NZ_LR595896.1
2310679
2310692
AGCGCG
13
+
2
GCGAGC
mltG
2309770
2310789
-
Genic
-909
NZ_LR595896.1
2311230
2311242
AAGGCG
12
+
2
GCGAAG
UKMR15_RS10010
2310868
2311914
+
Genic
-362
NZ_LR595896.1
2311767
2311779
CCG
12
-
4
GCG
UKMR15_RS10010
2310868
2311914
+
Genic
-899
NZ_LR595896.1
2312616
2312630
AGCGCG
14
+
2
CGAGCG
UKMR15_RS10015
2311985
2312836
+
Genic
-631
NZ_LR595896.1
2313187
2313199
ACG
12
-
4
TCG
UKMR15_RS10020
2312872
2313312
-
Genic
-315
NZ_LR595896.1
2313290
2313303
AAATCG
13
-
2
TTTCGA
UKMR15_RS10020
2312872
2313312
-
Genic
-418
NZ_LR595896.1
2314095
2314108
AGCGCG
13
+
2
AGCGCG
UKMR15_RS10025
2313684
2314643
-
Genic
-411
NZ_LR595896.1
2314503
2314515
CCCGCG
12
-
2
GGCGCG
UKMR15_RS10025
2313684
2314643
-
Genic
-819
NZ_LR595896.1
2314692
2314704
CCCGCG
12
-
2
GGCGCG
UKMR15_RS10030
2314749
2315747
-
Intergenic
45
NZ_LR595896.1
2314980
2314992
CCCGCG
12
-
2
GGCGCG
UKMR15_RS10030
2314749
2315747
-
Genic
-231
NZ_LR595896.1
2315624
2315636
ACGCGC
12
+
2
GCGCAC
UKMR15_RS10030
2314749
2315747
-
Genic
-875
NZ_LR595896.1
2315873
2315885
ACCCGC
12
-
2
GGTGCG
UKMR15_RS10035
2315838
2316320
-
Genic
-35
NZ_LR595896.1
2316087
2316099
ACGCCG
12
+
2
ACGCCG
UKMR15_RS10035
2315838
2316320
-
Genic
-249
NZ_LR595896.1
2317910
2317922
CCG
12
-
4
GCG
UKMR15_RS10050
2317383
2317847
+
Intergenic
-527
NZ_LR595896.1
2318289
2318302
CCGCG
13
+
2
CGCGC
UKMR15_RS10055
2318221
2319399
-
Genic
-68
NZ_LR595896.1
2318378
2318390
AACGTG
12
-
2
CGTTCA
UKMR15_RS10055
2318221
2319399
-
Genic
-157
NZ_LR595896.1
2319070
2319082
AGGGCG
12
-
2
TCGCCC
UKMR15_RS10055
2318221
2319399
-
Genic
-849
NZ_LR595896.1
2320112
2320124
AGGCCC
12
-
2
TGGGCC
UKMR15_RS10065
2320138
2322222
-
Intergenic
14
NZ_LR595896.1
2320324
2320336
ACATCG
12
-
2
ATGTCG
UKMR15_RS10065
2320138
2322222
-
Genic
-186
NZ_LR595896.1
2321874
2321887
ACGCG
13
+
2
CGACG
UKMR15_RS10065
2320138
2322222
-
Genic
-1736
NZ_LR595896.1
2322145
2322157
AGGCCG
12
+
2
AGGCCG
UKMR15_RS10065
2320138
2322222
-
Genic
-2007
NZ_LR595896.1
2323901
2323919
ACGCCC
18
+
3
CGCCCA
UKMR15_RS10070
2322466
2324106
-
Genic
-1435
NZ_LR595896.1
2324295
2324308
CCGCG
13
+
2
CGCCG
UKMR15_RS10075
2324234
2325799
+
Genic
-61
NZ_LR595896.1
2325660
2325672
AAGGAG
12
+
2
GAAGGA
UKMR15_RS10075
2324234
2325799
+
Genic
-1426