Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4876 to 4900 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3259087
3259099
ACCGTC
12
-
2
CGGTGA
tldD
3258469
3259965
+
Genic
-618
NZ_LR595896.1
3259134
3259149
CCG
15
-
5
GGC
tldD
3258469
3259965
+
Genic
-665
NZ_LR595896.1
3259901
3259914
ACGCCG
13
-
2
CGTCGG
tldD
3258469
3259965
+
Genic
-1432
NZ_LR595896.1
3260132
3260148
AAAAGT
16
-
2
TTTTAC
UKMR15_RS14260
3259965
3260186
+
Genic
-167
NZ_LR595896.1
3260611
3260623
AGCGCG
12
+
2
GAGCGC
aroG
3260375
3261448
+
Genic
-236
NZ_LR595896.1
3261431
3261443
AGCGGC
12
+
2
GCGGCA
aroG
3260375
3261448
+
Genic
-1056
NZ_LR595896.1
3262198
3262210
ACGTCG
12
+
2
TCGACG
hmpA
3261727
3262935
-
Genic
-471
NZ_LR595896.1
3262397
3262409
CCGCG
12
+
2
GCGCC
hmpA
3261727
3262935
-
Genic
-670
NZ_LR595896.1
3263169
3263181
CCGCG
12
-
2
GCGGC
UKMR15_RS14275
3263047
3263619
-
Genic
-122
NZ_LR595896.1
3263790
3263802
CCCCG
12
+
2
CCCCG
UKMR15_RS14280
3263783
3265192
+
Genic
-7
NZ_LR595896.1
3265295
3265307
AGCGCC
12
+
2
CAGCGC
UKMR15_RS14285
3265257
3266750
+
Genic
-38
NZ_LR595896.1
3265788
3265800
ACGCGC
12
-
2
TGCGCG
UKMR15_RS14285
3265257
3266750
+
Genic
-531
NZ_LR595896.1
3266323
3266335
CCGCG
12
+
2
GCCGC
UKMR15_RS14285
3265257
3266750
+
Genic
-1066
NZ_LR595896.1
3266542
3266556
ACGCCG
14
-
2
CGGCGT
UKMR15_RS14285
3265257
3266750
+
Genic
-1285
NZ_LR595896.1
3267734
3267747
ACGCCG
13
+
2
CCGACG
glcE
3266852
3267940
+
Genic
-882
NZ_LR595896.1
3267993
3268005
ACGCCG
12
+
2
CGACGC
glcF
3267947
3269173
+
Genic
-46
NZ_LR595896.1
3268492
3268504
AACATC
12
+
2
AACATC
glcF
3267947
3269173
+
Genic
-545
NZ_LR595896.1
3269025
3269039
AAGCGC
14
+
2
GCGCAA
glcF
3267947
3269173
+
Genic
-1078
NZ_LR595896.1
3269872
3269884
AGCCGC
12
-
2
GCTGCG
UKMR15_RS14300
3269406
3270104
+
Genic
-466
NZ_LR595896.1
3269900
3269912
AACCCG
12
+
2
CCCGAA
UKMR15_RS14300
3269406
3270104
+
Genic
-494
NZ_LR595896.1
3270260
3270272
AAGCGC
12
+
2
GCGCAA
UKMR15_RS14305
3270138
3270950
+
Genic
-122
NZ_LR595896.1
3270363
3270381
AGCGCG
18
-
3
TCGCGC
UKMR15_RS14305
3270138
3270950
+
Genic
-225
NZ_LR595896.1
3271411
3271423
AGGGCG
12
-
2
TCGCCC
phnE
3271407
3272222
-
Genic
-4
NZ_LR595896.1
3271462
3271477
ACGATG
15
+
2
CGATGA
phnE
3271407
3272222
-
Genic
-55
NZ_LR595896.1
3272347
3272361
AAGCAG
14
-
2
CTTCTG
phnD
3272219
3273214
-
Genic
-128