Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4901 to 4925 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3273155
3273167
CCG
12
-
4
GCG
phnD
3272219
3273214
-
Genic
-936
NZ_LR595896.1
3274094
3274106
AGCCCG
12
+
2
GCCCGA
phnC
3273297
3274220
-
Genic
-797
NZ_LR595896.1
3274713
3274729
AGCGCG
16
+
2
GCGCGA
UKMR15_RS14325
3274454
3275587
-
Genic
-259
NZ_LR595896.1
3275709
3275724
CCGCG
15
+
3
CGCCG
phnL
3275599
3276396
-
Genic
-110
NZ_LR595896.1
3275981
3275994
AGCGCG
13
+
2
CGAGCG
phnL
3275599
3276396
-
Genic
-382
NZ_LR595896.1
3276297
3276309
ACGCCG
12
+
2
GCCGAC
phnL
3275599
3276396
-
Genic
-698
NZ_LR595896.1
3276350
3276364
ACGATC
14
-
2
CGTGAT
phnL
3275599
3276396
-
Genic
-751
NZ_LR595896.1
3276970
3276983
CCG
13
+
4
CGC
phnK
3276405
3277175
-
Genic
-565
NZ_LR595896.1
3277546
3277558
ACGGCG
12
+
2
CGGCGA
UKMR15_RS14340
3277172
3278146
-
Genic
-374
NZ_LR595896.1
3277664
3277676
ACGCGC
12
-
2
GCGTGC
UKMR15_RS14340
3277172
3278146
-
Genic
-492
NZ_LR595896.1
3277818
3277830
ACG
12
-
4
TCG
UKMR15_RS14340
3277172
3278146
-
Genic
-646
NZ_LR595896.1
3278255
3278269
AGCTCG
14
+
2
CGAGCT
UKMR15_RS14345
3278143
3279351
-
Genic
-112
NZ_LR595896.1
3278491
3278503
ACGGCG
12
-
2
TCGCCG
UKMR15_RS14345
3278143
3279351
-
Genic
-348
NZ_LR595896.1
3278591
3278605
ACGGCG
14
+
2
CGACGG
UKMR15_RS14345
3278143
3279351
-
Genic
-448
NZ_LR595896.1
3278867
3278879
CCG
12
-
4
GCG
UKMR15_RS14345
3278143
3279351
-
Genic
-724
NZ_LR595896.1
3279275
3279288
CCGCG
13
+
2
CGCCG
UKMR15_RS14345
3278143
3279351
-
Genic
-1132
NZ_LR595896.1
3279550
3279563
ACGCG
13
+
2
GCGAC
phnH
3279351
3279980
-
Genic
-199
NZ_LR595896.1
3280276
3280288
AGGCGC
12
+
2
GCGCAG
phnG
3279977
3280525
-
Genic
-299
NZ_LR595896.1
3280534
3280546
AATCGG
12
+
2
ATCGGA
phnG
3279977
3280525
-
Intergenic
-557
NZ_LR595896.1
3280677
3280689
AACGC
12
+
2
AACGC
phnF
3280700
3281476
+
Intergenic
11
NZ_LR595896.1
3281363
3281376
ACGTCG
13
+
2
ACGTCG
phnF
3280700
3281476
+
Genic
-663
NZ_LR595896.1
3281487
3281499
CCGGCG
12
+
2
GCGCCG
UKMR15_RS14365
3281466
3282263
+
Genic
-21
NZ_LR595896.1
3281647
3281660
CCGCG
13
+
2
CGCGC
UKMR15_RS14365
3281466
3282263
+
Genic
-181
NZ_LR595896.1
3281772
3281787
ACGTCG
15
+
2
TCGACG
UKMR15_RS14365
3281466
3282263
+
Genic
-306
NZ_LR595896.1
3281818
3281832
ACGCGC
14
+
2
CGCGCA
UKMR15_RS14365
3281466
3282263
+
Genic
-352