Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4951 to 4975 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3297018
3297030
CCG
12
-
4
GGC
secD
3296377
3298401
+
Genic
-641
NZ_LR595896.1
3297207
3297220
AAGGCG
13
+
2
GCGAAG
secD
3296377
3298401
+
Genic
-830
NZ_LR595896.1
3297496
3297508
ATCGCC
12
-
2
CGATGG
secD
3296377
3298401
+
Genic
-1119
NZ_LR595896.1
3297519
3297531
AAGGGC
12
+
2
AAGGGC
secD
3296377
3298401
+
Genic
-1142
NZ_LR595896.1
3297886
3297901
AGCGCG
15
-
2
TCGCGC
secD
3296377
3298401
+
Genic
-1509
NZ_LR595896.1
3298829
3298842
AGCGCG
13
-
2
GCTCGC
secF
3298417
3299367
+
Genic
-412
NZ_LR595896.1
3299206
3299219
AGCGCG
13
-
2
TCGCGC
secF
3298417
3299367
+
Genic
-789
NZ_LR595896.1
3300160
3300172
CCGCG
12
+
2
GCGCC
UKMR15_RS14440
3299613
3300236
-
Genic
-547
NZ_LR595896.1
3300189
3300201
AAGACG
12
+
2
GACGAA
UKMR15_RS14440
3299613
3300236
-
Genic
-576
NZ_LR595896.1
3301912
3301927
ATCGCG
15
+
2
CGATCG
UKMR15_RS14455
3301554
3302117
-
Genic
-358
NZ_LR595896.1
3302897
3302909
AACGCG
12
-
2
TTCGCG
UKMR15_RS14465
3302382
3303038
+
Genic
-515
NZ_LR595896.1
3304728
3304740
AAGACG
12
+
2
CGAAGA
UKMR15_RS14475
3303690
3305345
+
Genic
-1038
NZ_LR595896.1
3304822
3304836
CCGCG
14
-
2
CGCGG
UKMR15_RS14475
3303690
3305345
+
Genic
-1132
NZ_LR595896.1
3305959
3305972
CG
13
+
6
GC
UKMR15_RS14480
3305342
3306112
+
Genic
-617
NZ_LR595896.1
3305967
3305980
CCGCG
13
-
2
GCGCG
UKMR15_RS14480
3305342
3306112
+
Genic
-625
NZ_LR595896.1
3306548
3306560
CCCGG
12
+
2
CCCGG
UKMR15_RS14485
3306972
3309089
+
Intergenic
412
NZ_LR595896.1
3307143
3307155
CCCGCG
12
+
2
CCGCGC
UKMR15_RS14485
3306972
3309089
+
Genic
-171
NZ_LR595896.1
3307861
3307879
ATGCGC
18
+
3
GCGCAT
UKMR15_RS14485
3306972
3309089
+
Genic
-889
NZ_LR595896.1
3308721
3308734
AGCCCG
13
-
2
TCGGGC
UKMR15_RS14485
3306972
3309089
+
Genic
-1749
NZ_LR595896.1
3308764
3308777
AACGCG
13
-
2
CGCGTT
UKMR15_RS14485
3306972
3309089
+
Genic
-1792
NZ_LR595896.1
3309527
3309541
AGCGCG
14
-
2
CGCGCT
UKMR15_RS14490
3309274
3310566
+
Genic
-253
NZ_LR595896.1
3309901
3309913
AGCGGC
12
+
2
GCGGCA
UKMR15_RS14490
3309274
3310566
+
Genic
-627
NZ_LR595896.1
3309970
3309982
AAGCCG
12
-
2
GCTTCG
UKMR15_RS14490
3309274
3310566
+
Genic
-696
NZ_LR595896.1
3310254
3310267
CCGCGG
13
+
2
CGCGGC
UKMR15_RS14490
3309274
3310566
+
Genic
-980
NZ_LR595896.1
3311506
3311519
CCGCG
13
+
2
CGCGC
UKMR15_RS14495
3312006
3312398
+
Intergenic
487