Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5001 to 5025 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3325790
3325802
CCCGCG
12
+
2
CCGCGC
UKMR15_RS14555
3325185
3326378
+
Genic
-605
NZ_LR595896.1
3326175
3326189
AGCGCG
14
-
2
CGCTCG
UKMR15_RS14555
3325185
3326378
+
Genic
-990
NZ_LR595896.1
3326290
3326304
CCGCG
14
-
2
GCGCG
UKMR15_RS14555
3325185
3326378
+
Genic
-1105
NZ_LR595896.1
3326983
3326995
CCCGCG
12
-
2
GGGCGC
dusB
3326586
3327650
+
Genic
-397
NZ_LR595896.1
3327241
3327253
ACGCG
12
+
2
CGACG
dusB
3326586
3327650
+
Genic
-655
NZ_LR595896.1
3327273
3327285
CCGCG
12
+
2
GCCGC
dusB
3326586
3327650
+
Genic
-687
NZ_LR595896.1
3327887
3327899
ACGGGG
12
-
2
CCCCGT
UKMR15_RS14565
3327647
3327880
+
Intergenic
-240
NZ_LR595896.1
3327943
3327955
AAACGG
12
-
2
TTTCCG
purH
3327925
3329490
+
Genic
-18
NZ_LR595896.1
3328288
3328300
ACATCG
12
+
2
ACATCG
purH
3327925
3329490
+
Genic
-363
NZ_LR595896.1
3329221
3329233
ACGCCG
12
-
2
TCGGCG
purH
3327925
3329490
+
Genic
-1296
NZ_LR595896.1
3330067
3330079
AACGTC
12
+
2
CGTCAA
ruvC
3329862
3330404
+
Genic
-205
NZ_LR595896.1
3333492
3333504
CCCGCG
12
+
2
CCGCGC
UKMR15_RS14595
3333411
3334553
+
Genic
-81
NZ_LR595896.1
3333963
3333975
CCGCG
12
-
2
GCGGC
UKMR15_RS14595
3333411
3334553
+
Genic
-552
NZ_LR595896.1
3334070
3334082
ACGGCG
12
+
2
GACGGC
UKMR15_RS14595
3333411
3334553
+
Genic
-659
NZ_LR595896.1
3334111
3334123
AGGCCG
12
-
2
CGGCCT
UKMR15_RS14595
3333411
3334553
+
Genic
-700
NZ_LR595896.1
3335867
3335879
ACGCGG
12
-
2
CGCGTC
UKMR15_RS14605
3335406
3335864
-
Intergenic
-461
NZ_LR595896.1
3335884
3335896
CCGCG
12
-
2
CGCGG
UKMR15_RS14605
3335406
3335864
-
Intergenic
-478
NZ_LR595896.1
3338303
3338315
CCG
12
-
4
GCG
UKMR15_RS14620
3337376
3338539
+
Genic
-927
NZ_LR595896.1
3338429
3338441
AACGCG
12
-
2
TCGCGT
UKMR15_RS14620
3337376
3338539
+
Genic
-1053
NZ_LR595896.1
3338543
3338556
CCCGG
13
-
2
CGGGC
UKMR15_RS14620
3337376
3338539
+
Intergenic
-1167
NZ_LR595896.1
3338575
3338589
CCCGCG
14
+
2
CGCGCC
UKMR15_RS14620
3337376
3338539
+
Intergenic
-1199
NZ_LR595896.1
3338807
3338823
AGCGGC
16
-
2
CGCTGC
UKMR15_RS14625
3338645
3339343
-
Genic
-162
NZ_LR595896.1
3340906
3340918
AGCGCG
12
+
2
AGCGCG
UKMR15_RS14635
3340160
3341047
+
Genic
-746
NZ_LR595896.1
3341233
3341245
AACCGC
12
+
2
CCGCAA
erpA
3341215
3341583
-
Genic
-18
NZ_LR595896.1
3343562
3343576
AAGTGG
14
-
2
TCCACT
UKMR15_RS14655
3343292
3343714
+
Genic
-270