Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5051 to 5075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3367429
3367442
ACAGCC
13
+
2
AGCCAC
UKMR15_RS14785
3367216
3367638
-
Genic
-213
NZ_LR595896.1
3368043
3368055
ACGCCG
12
-
2
GCGTCG
UKMR15_RS14790
3367656
3369032
-
Genic
-387
NZ_LR595896.1
3368790
3368802
ACGCCG
12
-
2
GCGTCG
UKMR15_RS14790
3367656
3369032
-
Genic
-1134
NZ_LR595896.1
3369073
3369085
CCGCG
12
-
2
CGGCG
UKMR15_RS14795
3369064
3370152
-
Genic
-9
NZ_LR595896.1
3369166
3369181
CCGCG
15
+
3
CGCGC
UKMR15_RS14795
3369064
3370152
-
Genic
-102
NZ_LR595896.1
3369400
3369415
ACGAGC
15
+
2
AGCACG
UKMR15_RS14795
3369064
3370152
-
Genic
-336
NZ_LR595896.1
3369416
3369431
AGGGCG
15
-
2
CCTCGC
UKMR15_RS14795
3369064
3370152
-
Genic
-352
NZ_LR595896.1
3370202
3370216
CCG
14
-
4
GCG
UKMR15_RS14800
3370198
3370749
-
Genic
-4
NZ_LR595896.1
3371498
3371511
AAGTCG
13
-
2
CTTCGA
UKMR15_RS14805
3370791
3373385
-
Genic
-707
NZ_LR595896.1
3372034
3372047
ACCGGC
13
+
2
CCGGCA
UKMR15_RS14805
3370791
3373385
-
Genic
-1243
NZ_LR595896.1
3372071
3372083
ATCCCG
12
-
2
GATCGG
UKMR15_RS14805
3370791
3373385
-
Genic
-1280
NZ_LR595896.1
3372335
3372347
AACGCG
12
+
2
CGCGAA
UKMR15_RS14805
3370791
3373385
-
Genic
-1544
NZ_LR595896.1
3373596
3373609
AGCCGC
13
-
2
GGCTGC
UKMR15_RS14810
3373560
3374090
-
Genic
-36
NZ_LR595896.1
3373674
3373686
CCCGCG
12
-
2
GGCGCG
UKMR15_RS14810
3373560
3374090
-
Genic
-114
NZ_LR595896.1
3373918
3373930
CCCGCG
12
-
2
GCGCGG
UKMR15_RS14810
3373560
3374090
-
Genic
-358
NZ_LR595896.1
3375647
3375659
AATCGC
12
+
2
GCAATC
dapB
3374867
3375664
-
Genic
-780
NZ_LR595896.1
3375867
3375881
AACTGG
14
+
2
TGGAAC
UKMR15_RS14825
3375744
3376529
-
Genic
-123
NZ_LR595896.1
3376106
3376118
CCGCGG
12
+
2
CGCGGC
UKMR15_RS14825
3375744
3376529
-
Genic
-362
NZ_LR595896.1
3377551
3377563
AGATCG
12
-
2
TCGATC
UKMR15_RS14835
3377248
3377772
-
Genic
-303
NZ_LR595896.1
3377604
3377617
CCCG
13
+
3
CCGC
UKMR15_RS14835
3377248
3377772
-
Genic
-356
NZ_LR595896.1
3377804
3377816
AGGCGC
12
+
2
AGGCGC
alc
3377786
3378796
-
Genic
-18
NZ_LR595896.1
3378072
3378084
AGCGCG
12
+
2
GCGCGA
alc
3377786
3378796
-
Genic
-286
NZ_LR595896.1
3379027
3379039
CCCGCG
12
-
2
GCGCGG
UKMR15_RS14845
3378934
3380256
-
Genic
-93
NZ_LR595896.1
3379610
3379622
ACGCG
12
+
2
GCGAC
UKMR15_RS14845
3378934
3380256
-
Genic
-676
NZ_LR595896.1
3379991
3380003
AGCGCG
12
+
2
CGAGCG
UKMR15_RS14845
3378934
3380256
-
Genic
-1057