Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5101 to 5125 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3399357
3399369
ACAGCC
12
+
2
ACAGCC
UKMR15_RS14935
3398960
3400033
-
Genic
-397
NZ_LR595896.1
3402492
3402505
AACATC
13
-
2
TGATGT
araG
3402044
3403555
-
Genic
-448
NZ_LR595896.1
3403723
3403735
CCG
12
-
4
GCG
UKMR15_RS14955
3403644
3404639
-
Genic
-79
NZ_LR595896.1
3403734
3403746
AAGGC
12
-
2
GCCTT
UKMR15_RS14955
3403644
3404639
-
Genic
-90
NZ_LR595896.1
3403868
3403886
ATCGGC
18
-
3
GCCGAT
UKMR15_RS14955
3403644
3404639
-
Genic
-224
NZ_LR595896.1
3404327
3404339
AAGGCG
12
-
2
CTTCGC
UKMR15_RS14955
3403644
3404639
-
Genic
-683
NZ_LR595896.1
3405138
3405150
CCCGCG
12
+
2
CCGCGC
UKMR15_RS14960
3404769
3405548
-
Genic
-369
NZ_LR595896.1
3406573
3406585
ACGCGC
12
-
2
GCGTGC
UKMR15_RS14970
3406272
3407285
-
Genic
-301
NZ_LR595896.1
3407754
3407766
ACGGCG
12
-
2
CGTCGC
UKMR15_RS14975
3407282
3408199
-
Genic
-472
NZ_LR595896.1
3408739
3408751
AGGCGC
12
-
2
CTGCGC
UKMR15_RS14980
3408464
3408865
-
Genic
-275
NZ_LR595896.1
3409172
3409184
ACGCTC
12
-
2
TGAGCG
UKMR15_RS14985
3408958
3410592
-
Genic
-214
NZ_LR595896.1
3410082
3410094
AACGGG
12
+
2
GAACGG
UKMR15_RS14985
3408958
3410592
-
Genic
-1124
NZ_LR595896.1
3412441
3412454
CCG
13
+
4
CCG
UKMR15_RS15000
3412718
3414796
-
Intergenic
264
NZ_LR595896.1
3412684
3412697
CG
13
+
6
CG
UKMR15_RS15000
3412718
3414796
-
Intergenic
21
NZ_LR595896.1
3412789
3412801
AAGCGG
12
-
2
CGCTTC
UKMR15_RS15000
3412718
3414796
-
Genic
-71
NZ_LR595896.1
3413334
3413346
CCGCG
12
-
2
GCGGC
UKMR15_RS15000
3412718
3414796
-
Genic
-616
NZ_LR595896.1
3413808
3413820
ACAGCG
12
+
2
ACAGCG
UKMR15_RS15000
3412718
3414796
-
Genic
-1090
NZ_LR595896.1
3413915
3413927
CG
12
+
6
CG
UKMR15_RS15000
3412718
3414796
-
Genic
-1197
NZ_LR595896.1
3414834
3414846
AAGCG
12
-
2
CGCTT
UKMR15_RS15000
3412718
3414796
-
Intergenic
-2116
NZ_LR595896.1
3415206
3415218
AGCCGC
12
-
2
GCTGCG
UKMR15_RS15005
3414920
3415489
-
Genic
-286
NZ_LR595896.1
3415740
3415752
ATCGGC
12
+
2
ATCGGC
mpl
3415486
3417000
-
Genic
-254
NZ_LR595896.1
3417782
3417795
ACCGCG
13
-
2
GTCGCG
UKMR15_RS15020
3417741
3418301
+
Genic
-41
NZ_LR595896.1
3419087
3419099
AAGGCG
12
+
2
CGAAGG
UKMR15_RS15030
3419017
3419490
+
Genic
-70
NZ_LR595896.1
3420057
3420071
CCG
14
-
4
GGC
accC
3419575
3420942
+
Genic
-482
NZ_LR595896.1
3420300
3420313
CCCGCG
13
+
2
GCGCCC
accC
3419575
3420942
+
Genic
-725