Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5126 to 5150 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3421046
3421058
ACGCCG
12
+
2
GCCGAC
prmA
3420945
3421847
+
Genic
-101
NZ_LR595896.1
3421174
3421186
CCG
12
+
4
CGC
prmA
3420945
3421847
+
Genic
-229
NZ_LR595896.1
3421348
3421360
AGCTCG
12
+
2
GCTCGA
prmA
3420945
3421847
+
Genic
-403
NZ_LR595896.1
3421522
3421534
ACATCG
12
+
2
CATCGA
prmA
3420945
3421847
+
Genic
-577
NZ_LR595896.1
3421773
3421785
ATATCG
12
+
2
ATATCG
prmA
3420945
3421847
+
Genic
-828
NZ_LR595896.1
3421975
3421987
ACCGC
12
-
2
GTGCG
UKMR15_RS15045
3421895
3423322
+
Genic
-80
NZ_LR595896.1
3422219
3422231
AGCGCG
12
+
2
CGAGCG
UKMR15_RS15045
3421895
3423322
+
Genic
-324
NZ_LR595896.1
3422575
3422588
AGATCG
13
-
2
CTCGAT
UKMR15_RS15045
3421895
3423322
+
Genic
-680
NZ_LR595896.1
3422625
3422637
AGGCGG
12
-
2
CGCCTC
UKMR15_RS15045
3421895
3423322
+
Genic
-730
NZ_LR595896.1
3422929
3422941
ACGATC
12
+
2
ACGATC
UKMR15_RS15045
3421895
3423322
+
Genic
-1034
NZ_LR595896.1
3423620
3423634
ACG
14
-
4
GTC
tpx
3423390
3423893
+
Genic
-230
NZ_LR595896.1
3428236
3428248
AGCGCG
12
-
2
CGCTCG
UKMR15_RS15075
3426691
3427902
-
Intergenic
-1545
NZ_LR595896.1
3430172
3430184
ACGCCG
12
-
2
GCGTCG
UKMR15_RS15085
3431281
3431562
+
Intergenic
1097
NZ_LR595896.1
3431082
3431095
ATCGCG
13
+
2
CGCGAT
UKMR15_RS15085
3431281
3431562
+
Intergenic
186
NZ_LR595896.1
3431350
3431362
CCG
12
-
4
GCG
UKMR15_RS15085
3431281
3431562
+
Genic
-69
NZ_LR595896.1
3432555
3432568
AGGCGC
13
-
2
GCGCCT
UKMR15_RS15095
3432314
3432634
-
Genic
-241
NZ_LR595896.1
3432738
3432752
CCGCG
14
+
2
CGCGC
ccsA
3432648
3433547
-
Genic
-90
NZ_LR595896.1
3432746
3432758
CCGCGG
12
+
2
GCCGCG
ccsA
3432648
3433547
-
Genic
-98
NZ_LR595896.1
3433043
3433057
AGCATC
14
+
2
CATCAG
ccsA
3432648
3433547
-
Genic
-395
NZ_LR595896.1
3433147
3433159
ACGCGC
12
+
2
GCACGC
ccsA
3432648
3433547
-
Genic
-499
NZ_LR595896.1
3433180
3433192
ACGCG
12
+
2
GCGAC
ccsA
3432648
3433547
-
Genic
-532
NZ_LR595896.1
3433289
3433301
AACGCG
12
+
2
CGCGAA
ccsA
3432648
3433547
-
Genic
-641
NZ_LR595896.1
3434858
3434871
CCCGCG
13
-
2
GCGGGC
ffh
3433635
3435002
+
Genic
-1223
NZ_LR595896.1
3435397
3435412
ACGAGC
15
-
2
TCGTGC
UKMR15_RS15110
3435100
3435651
+
Genic
-297
NZ_LR595896.1
3435899
3435911
ACGAGC
12
+
2
ACGAGC
UKMR15_RS15115
3435842
3436444
-
Genic
-57