Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5176 to 5200 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3461120
3461134
ACGGGC
14
-
2
CCCGTG
ftsZ
3460253
3461449
-
Genic
-867
NZ_LR595896.1
3461237
3461249
CCGGCG
12
+
2
GCGCCG
ftsZ
3460253
3461449
-
Genic
-984
NZ_LR595896.1
3461284
3461296
AGCGCG
12
+
2
GCGCGA
ftsZ
3460253
3461449
-
Genic
-1031
NZ_LR595896.1
3461419
3461431
AAACCG
12
-
2
GGTTTC
ftsZ
3460253
3461449
-
Genic
-1166
NZ_LR595896.1
3462484
3462496
AAAAGG
12
-
2
TTCCTT
ftsA
3461558
3462790
-
Genic
-926
NZ_LR595896.1
3462675
3462687
AGGCCG
12
+
2
GGCCGA
ftsA
3461558
3462790
-
Genic
-1117
NZ_LR595896.1
3463980
3463992
ACGATC
12
+
2
ACGATC
UKMR15_RS15255
3463590
3464528
-
Genic
-390
NZ_LR595896.1
3464232
3464244
AGCCG
12
+
2
GCCGA
UKMR15_RS15255
3463590
3464528
-
Genic
-642
NZ_LR595896.1
3464606
3464618
ACGGCG
12
-
2
CGTCGC
UKMR15_RS15260
3464530
3465927
-
Genic
-76
NZ_LR595896.1
3464817
3464830
ACGCGC
13
-
2
GCGCGT
UKMR15_RS15260
3464530
3465927
-
Genic
-287
NZ_LR595896.1
3465056
3465072
ATCGCG
16
+
2
TCGCGA
UKMR15_RS15260
3464530
3465927
-
Genic
-526
NZ_LR595896.1
3465566
3465580
ACG
14
-
4
TCG
UKMR15_RS15260
3464530
3465927
-
Genic
-1036
NZ_LR595896.1
3465595
3465607
ATCGCG
12
+
2
GCGATC
UKMR15_RS15260
3464530
3465927
-
Genic
-1065
NZ_LR595896.1
3466407
3466419
AGCGCG
12
+
2
AGCGCG
murG
3465924
3467027
-
Genic
-483
NZ_LR595896.1
3466993
3467005
ACCATC
12
+
2
CCATCA
murG
3465924
3467027
-
Genic
-1069
NZ_LR595896.1
3467372
3467385
AGCGCG
13
+
2
CGAGCG
ftsW
3467149
3468441
-
Genic
-223
NZ_LR595896.1
3467599
3467611
AAGGC
12
-
2
GCCTT
ftsW
3467149
3468441
-
Genic
-450
NZ_LR595896.1
3467761
3467773
ATCGCG
12
+
2
ATCGCG
ftsW
3467149
3468441
-
Genic
-612
NZ_LR595896.1
3467806
3467818
AGC
12
+
4
AGC
ftsW
3467149
3468441
-
Genic
-657
NZ_LR595896.1
3468226
3468238
AGCCCG
12
+
2
CCGAGC
ftsW
3467149
3468441
-
Genic
-1077
NZ_LR595896.1
3468369
3468382
CCGCG
13
-
2
GCGCG
ftsW
3467149
3468441
-
Genic
-1220
NZ_LR595896.1
3469489
3469503
ACCGCG
14
+
2
CCGCGA
UKMR15_RS15275
3468438
3469952
-
Genic
-1051
NZ_LR595896.1
3469540
3469554
ACG
14
-
4
TCG
UKMR15_RS15275
3468438
3469952
-
Genic
-1102
NZ_LR595896.1
3470260
3470272
AGCGCG
12
+
2
AGCGCG
UKMR15_RS15280
3469978
3471147
-
Genic
-282
NZ_LR595896.1
3470366
3470378
CCCGCG
12
+
2
CGCCCG
UKMR15_RS15280
3469978
3471147
-
Genic
-388