Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5226 to 5250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3495692
3495704
CG
12
+
6
CG
pcaF
3494864
3496066
+
Genic
-828
NZ_LR595896.1
3495754
3495766
CCGGCG
12
+
2
CCGGCG
pcaF
3494864
3496066
+
Genic
-890
NZ_LR595896.1
3496039
3496055
ATCGCG
16
+
2
ATCGCG
pcaF
3494864
3496066
+
Genic
-1175
NZ_LR595896.1
3496453
3496466
AGCGGC
13
-
2
CGCTGC
UKMR15_RS15380
3496162
3496953
+
Genic
-291
NZ_LR595896.1
3496497
3496509
CCGGCG
12
+
2
GGCGCC
UKMR15_RS15380
3496162
3496953
+
Genic
-335
NZ_LR595896.1
3497057
3497069
AGCCGC
12
+
2
GCAGCC
paaI
3497039
3497431
+
Genic
-18
NZ_LR595896.1
3497871
3497885
ACGGCT
14
+
2
GCTACG
paaF
3497469
3498767
+
Genic
-402
NZ_LR595896.1
3498812
3498824
CCCGGG
12
+
2
CGGGCC
paaF
3497469
3498767
+
Intergenic
-1343
NZ_LR595896.1
3498942
3498956
AAAGC
14
+
2
AAGCA
UKMR15_RS15395
3499095
3500372
-
Intergenic
139
NZ_LR595896.1
3498955
3498968
CCGCG
13
+
2
CGCGC
UKMR15_RS15395
3499095
3500372
-
Intergenic
127
NZ_LR595896.1
3499630
3499642
ACCTGC
12
+
2
CCTGCA
UKMR15_RS15395
3499095
3500372
-
Genic
-535
NZ_LR595896.1
3500160
3500172
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15395
3499095
3500372
-
Genic
-1065
NZ_LR595896.1
3501923
3501935
AGCGCG
12
-
2
GCGCTC
UKMR15_RS15410
3501678
3502406
+
Genic
-245
NZ_LR595896.1
3502469
3502481
AGGGCC
12
-
2
CCTGGC
UKMR15_RS15410
3501678
3502406
+
Intergenic
-791
NZ_LR595896.1
3502731
3502743
CCGCG
12
+
2
CGCGC
UKMR15_RS15415
3502769
3504262
+
Intergenic
26
NZ_LR595896.1
3503537
3503549
ACAGCG
12
-
2
CGCTGT
UKMR15_RS15415
3502769
3504262
+
Genic
-768
NZ_LR595896.1
3504086
3504100
ATCGCG
14
+
2
TCGCGA
UKMR15_RS15415
3502769
3504262
+
Genic
-1317
NZ_LR595896.1
3504170
3504182
AATCCG
12
+
2
CCGAAT
UKMR15_RS15415
3502769
3504262
+
Genic
-1401
NZ_LR595896.1
3505053
3505065
CCG
12
+
4
CGC
trpD
3504884
3505915
+
Genic
-169
NZ_LR595896.1
3505189
3505202
CCG
13
-
4
GCG
trpD
3504884
3505915
+
Genic
-305
NZ_LR595896.1
3505939
3505952
AATCCG
13
+
2
CCGAAT
trpD
3504884
3505915
+
Intergenic
-1055
NZ_LR595896.1
3506769
3506781
ATCGCC
12
-
2
GGCGAT
UKMR15_RS15435
3506774
3507421
+
Genic
5
NZ_LR595896.1
3506849
3506870
CCGGCG
21
+
3
GCGCCG
UKMR15_RS15435
3506774
3507421
+
Genic
-75
NZ_LR595896.1
3506911
3506927
AGCGCG
16
-
2
GCGCTC
UKMR15_RS15435
3506774
3507421
+
Genic
-137
NZ_LR595896.1
3506940
3506952
AGCCGC
12
-
2
GCTGCG
UKMR15_RS15435
3506774
3507421
+
Genic
-166