Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5251 to 5275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3507272
3507287
AACTCG
15
+
2
TCGAAC
UKMR15_RS15435
3506774
3507421
+
Genic
-498
NZ_LR595896.1
3508052
3508064
ACGCGC
12
+
2
CGCGCA
UKMR15_RS15440
3507463
3508251
+
Genic
-589
NZ_LR595896.1
3508789
3508802
ACGATC
13
+
2
CGATCA
UKMR15_RS15445
3508470
3509066
-
Genic
-319
NZ_LR595896.1
3509126
3509138
CCG
12
+
4
CGC
UKMR15_RS15445
3508470
3509066
-
Intergenic
-656
NZ_LR595896.1
3510443
3510455
ATCGCG
12
+
2
CGCGAT
UKMR15_RS15450
3509205
3511034
-
Genic
-1238
NZ_LR595896.1
3510962
3510974
ACGCTC
12
-
2
GAGCGT
UKMR15_RS15450
3509205
3511034
-
Genic
-1757
NZ_LR595896.1
3511360
3511374
AAGTCG
14
-
2
TCGACT
UKMR15_RS15455
3511134
3511862
-
Genic
-226
NZ_LR595896.1
3511808
3511820
ACGGCG
12
-
2
CGTCGC
UKMR15_RS15455
3511134
3511862
-
Genic
-674
NZ_LR595896.1
3511932
3511945
CCGCG
13
+
2
CGCCG
UKMR15_RS15460
3511964
3513145
-
Intergenic
19
NZ_LR595896.1
3512479
3512492
AGCGGC
13
+
2
CGGCAG
UKMR15_RS15460
3511964
3513145
-
Genic
-515
NZ_LR595896.1
3512683
3512697
AGCGCG
14
+
2
CGCGAG
UKMR15_RS15460
3511964
3513145
-
Genic
-719
NZ_LR595896.1
3513059
3513071
AGCGCG
12
+
2
AGCGCG
UKMR15_RS15460
3511964
3513145
-
Genic
-1095
NZ_LR595896.1
3513567
3513579
AATAGT
12
-
2
TATTAC
UKMR15_RS15460
3511964
3513145
-
Intergenic
-1603
NZ_LR595896.1
3515277
3515289
AGCGCG
12
-
2
GCTCGC
ychF
3514886
3515980
+
Genic
-391
NZ_LR595896.1
3516256
3516268
AGCGCG
12
-
2
CGCTCG
UKMR15_RS15475
3516091
3516372
-
Genic
-165
NZ_LR595896.1
3517296
3517309
AGCGC
13
+
2
CGCAG
UKMR15_RS15485
3517104
3517937
+
Genic
-192
NZ_LR595896.1
3517528
3517540
AGGCGC
12
+
2
GGCGCA
UKMR15_RS15485
3517104
3517937
+
Genic
-424
NZ_LR595896.1
3518959
3518972
AATTCG
13
+
2
GAATTC
gabP
3518009
3519412
-
Genic
-950
NZ_LR595896.1
3519358
3519370
ACGTC
12
-
2
CGTGA
gabP
3518009
3519412
-
Genic
-1349
NZ_LR595896.1
3519966
3519978
AGCGGC
12
+
2
GCAGCG
UKMR15_RS15495
3519917
3520060
-
Genic
-49
NZ_LR595896.1
3521284
3521296
CCCG
12
+
3
CCGC
UKMR15_RS15505
3520673
3521653
-
Genic
-611
NZ_LR595896.1
3521566
3521578
CCG
12
+
4
GCC
UKMR15_RS15505
3520673
3521653
-
Genic
-893
NZ_LR595896.1
3521813
3521825
CCGCG
12
-
2
GCGGC
UKMR15_RS15510
3521793
3522113
+
Genic
-20
NZ_LR595896.1
3523688
3523700
AACTTC
12
+
2
CTTCAA
ettA
3522400
3524067
+
Genic
-1288
NZ_LR595896.1
3523877
3523889
ACCATC
12
-
2
GGTGAT
ettA
3522400
3524067
+
Genic
-1477