Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5201 to 5225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3470820
3470832
AAGCCG
12
+
2
GCCGAA
UKMR15_RS15280
3469978
3471147
-
Genic
-842
NZ_LR595896.1
3470904
3470916
AGGATC
12
+
2
GATCAG
UKMR15_RS15280
3469978
3471147
-
Genic
-926
NZ_LR595896.1
3471326
3471338
CCCGCG
12
+
2
CGCGCC
murF
3471162
3472568
-
Genic
-164
NZ_LR595896.1
3472734
3472746
AGCGCG
12
-
2
TCGCGC
UKMR15_RS15290
3472565
3474109
-
Genic
-169
NZ_LR595896.1
3473016
3473028
ACG
12
+
4
CGA
UKMR15_RS15290
3472565
3474109
-
Genic
-451
NZ_LR595896.1
3473243
3473255
ACCGCG
12
-
2
GTCGCG
UKMR15_RS15290
3472565
3474109
-
Genic
-678
NZ_LR595896.1
3473393
3473405
AGCGC
12
+
2
GCGCA
UKMR15_RS15290
3472565
3474109
-
Genic
-828
NZ_LR595896.1
3473422
3473435
AAGGCG
13
-
2
CTTCGC
UKMR15_RS15290
3472565
3474109
-
Genic
-857
NZ_LR595896.1
3473909
3473921
CCGCG
12
+
2
GCCGC
UKMR15_RS15290
3472565
3474109
-
Genic
-1344
NZ_LR595896.1
3474187
3474199
CCG
12
-
4
GCG
UKMR15_RS15295
3474106
3475950
-
Genic
-81
NZ_LR595896.1
3474684
3474696
ACGGCT
12
-
2
GCCGTA
UKMR15_RS15295
3474106
3475950
-
Genic
-578
NZ_LR595896.1
3474830
3474842
ACGATG
12
-
2
TCATCG
UKMR15_RS15295
3474106
3475950
-
Genic
-724
NZ_LR595896.1
3474995
3475007
AGCGCG
12
+
2
CGAGCG
UKMR15_RS15295
3474106
3475950
-
Genic
-889
NZ_LR595896.1
3478829
3478841
AAAGAG
12
-
2
CTCTTT
UKMR15_RS15320
3478961
3480121
+
Intergenic
120
NZ_LR595896.1
3480334
3480346
AAGCGG
12
-
2
TTCCGC
UKMR15_RS15325
3480226
3481689
-
Genic
-108
NZ_LR595896.1
3481224
3481236
AACGCG
12
-
2
GTTCGC
UKMR15_RS15325
3480226
3481689
-
Genic
-998
NZ_LR595896.1
3481699
3481711
AAAAAC
12
+
2
AAAAAC
UKMR15_RS15325
3480226
3481689
-
Intergenic
-1473
NZ_LR595896.1
3482462
3482474
AGCGGC
12
+
2
CGGCAG
UKMR15_RS15330
3481950
3483623
-
Genic
-512
NZ_LR595896.1
3482910
3482922
AGGCGC
12
-
2
GCCTGC
UKMR15_RS15330
3481950
3483623
-
Genic
-960
NZ_LR595896.1
3483312
3483324
AACGTC
12
-
2
TTGACG
UKMR15_RS15330
3481950
3483623
-
Genic
-1362
NZ_LR595896.1
3483771
3483784
ACCTCG
13
+
2
CTCGAC
UKMR15_RS15335
3483763
3485838
-
Genic
-8
NZ_LR595896.1
3485155
3485167
AGCGCG
12
+
2
AGCGCG
UKMR15_RS15335
3483763
3485838
-
Genic
-1392
NZ_LR595896.1
3486075
3486087
AAGCG
12
+
2
GCGAA
rrf
3486257
3486370
-
Intergenic
170
NZ_LR595896.1
3492127
3492139
AAGGGC
12
+
2
GGCAAG
UKMR15_RS15365
3492162
3492938
-
Intergenic
23
NZ_LR595896.1
3493346
3493358
CCG
12
+
4
CGC
paaN
3493069
3494775
+
Genic
-277