Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5151 to 5175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3436399
3436411
AATGAG
12
+
2
AATGAG
UKMR15_RS15115
3435842
3436444
-
Genic
-557
NZ_LR595896.1
3437488
3437500
AGCGGC
12
+
2
GCAGCG
UKMR15_RS15120
3436476
3438212
-
Genic
-1012
NZ_LR595896.1
3438156
3438168
ACGCCG
12
-
2
TCGGCG
UKMR15_RS15120
3436476
3438212
-
Genic
-1680
NZ_LR595896.1
3440806
3440819
CCGCGG
13
+
2
CGGCCG
obgE
3441135
3442253
-
Intergenic
316
NZ_LR595896.1
3442452
3442464
ACG
12
+
4
GAC
rpmA
3442438
3442701
-
Genic
-14
NZ_LR595896.1
3442906
3442918
AAGGCG
12
-
2
TTCGCC
rplU
3442730
3443041
-
Genic
-176
NZ_LR595896.1
3447870
3447882
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15175
3447187
3448404
+
Genic
-683
NZ_LR595896.1
3447937
3447949
AGCGCG
12
-
2
TCGCGC
UKMR15_RS15175
3447187
3448404
+
Genic
-750
NZ_LR595896.1
3448204
3448216
ACGGCG
12
-
2
TCGCCG
UKMR15_RS15175
3447187
3448404
+
Genic
-1017
NZ_LR595896.1
3448867
3448879
AGCGCG
12
-
2
CGCGCT
UKMR15_RS15180
3448449
3449363
+
Genic
-418
NZ_LR595896.1
3450319
3450333
AGCGCC
14
+
2
AGCGCC
zapD
3450127
3450882
+
Genic
-192
NZ_LR595896.1
3452461
3452474
AACGCG
13
+
2
GAACGC
UKMR15_RS15205
3451703
3452572
-
Genic
-758
NZ_LR595896.1
3452494
3452506
CCG
12
-
4
CGG
UKMR15_RS15205
3451703
3452572
-
Genic
-791
NZ_LR595896.1
3453564
3453576
AACGCG
12
-
2
CGCGTT
argJ
3452593
3453834
-
Genic
-971
NZ_LR595896.1
3454023
3454035
AGCGGC
12
-
2
TGCCGC
secA
3453989
3456784
-
Genic
-34
NZ_LR595896.1
3454033
3454045
ACGGGC
12
+
2
GCACGG
secA
3453989
3456784
-
Genic
-44
NZ_LR595896.1
3454157
3454171
CCG
14
+
4
GCC
secA
3453989
3456784
-
Genic
-168
NZ_LR595896.1
3455888
3455900
ACGGCG
12
-
2
TCGCCG
secA
3453989
3456784
-
Genic
-1899
NZ_LR595896.1
3457124
3457137
ACGGCG
13
+
2
CGGCGA
UKMR15_RS15220
3457153
3457470
-
Intergenic
16
NZ_LR595896.1
3457186
3457343
AAGCCG
157
-
26
GCTTCG
UKMR15_RS15220
3457153
3457470
-
Genic
-33
NZ_LR595896.1
3457731
3457743
ACGCTC
12
+
2
CACGCT
UKMR15_RS15225
3457532
3458011
+
Genic
-199
NZ_LR595896.1
3457843
3457855
ACGCGC
12
-
2
GTGCGC
UKMR15_RS15225
3457532
3458011
+
Genic
-311
NZ_LR595896.1
3458752
3458765
CG
13
+
6
GC
UKMR15_RS15230
3458402
3459319
-
Genic
-350
NZ_LR595896.1
3460149
3460161
CCCGG
12
+
2
GCCCG
UKMR15_RS15235
3459561
3460067
-
Intergenic
-588
NZ_LR595896.1
3461038
3461051
AACTCG
13
+
2
CTCGAA
ftsZ
3460253
3461449
-
Genic
-785