Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5301 to 5325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3539427
3539439
AGGCGG
12
+
2
GGCGGA
UKMR15_RS15590
3539217
3539792
+
Genic
-210
NZ_LR595896.1
3540612
3540624
CCGCG
12
+
2
GCCGC
UKMR15_RS15595
3539752
3541035
-
Genic
-860
NZ_LR595896.1
3540751
3540763
ATCCCC
12
+
2
CCCATC
UKMR15_RS15595
3539752
3541035
-
Genic
-999
NZ_LR595896.1
3540811
3540823
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15595
3539752
3541035
-
Genic
-1059
NZ_LR595896.1
3541277
3541289
AGGCGC
12
+
2
GCGCAG
UKMR15_RS15600
3541194
3541838
+
Genic
-83
NZ_LR595896.1
3542969
3542983
ACAGGG
14
-
2
GTCCCT
UKMR15_RS15610
3542912
3543814
-
Genic
-57
NZ_LR595896.1
3543309
3543321
ACGAGC
12
+
2
GCACGA
UKMR15_RS15610
3542912
3543814
-
Genic
-397
NZ_LR595896.1
3543551
3543565
CG
14
+
7
GC
UKMR15_RS15610
3542912
3543814
-
Genic
-639
NZ_LR595896.1
3543983
3543995
CG
12
+
6
CG
UKMR15_RS15615
3543942
3545078
-
Genic
-41
NZ_LR595896.1
3544054
3544066
ACG
12
+
4
CGA
UKMR15_RS15615
3543942
3545078
-
Genic
-112
NZ_LR595896.1
3544321
3544333
AGATCG
12
-
2
CGATCT
UKMR15_RS15615
3543942
3545078
-
Genic
-379
NZ_LR595896.1
3544775
3544788
AGGCGC
13
-
2
CTGCGC
UKMR15_RS15615
3543942
3545078
-
Genic
-833
NZ_LR595896.1
3544980
3544993
CCGCG
13
-
2
GCGCG
UKMR15_RS15615
3543942
3545078
-
Genic
-1038
NZ_LR595896.1
3544987
3544999
CCG
12
-
4
GCG
UKMR15_RS15615
3543942
3545078
-
Genic
-1045
NZ_LR595896.1
3545038
3545050
ACGCCG
12
-
2
CGTCGG
UKMR15_RS15615
3543942
3545078
-
Genic
-1096
NZ_LR595896.1
3545447
3545461
CCGCGG
14
+
2
GCCGCG
UKMR15_RS15625
3545435
3546553
-
Genic
-12
NZ_LR595896.1
3545827
3545841
AGCGCG
14
+
2
GAGCGC
UKMR15_RS15625
3545435
3546553
-
Genic
-392
NZ_LR595896.1
3546491
3546503
ACGGCG
12
+
2
ACGGCG
UKMR15_RS15625
3545435
3546553
-
Genic
-1056
NZ_LR595896.1
3546503
3546515
ATCGC
12
+
2
CGCAT
UKMR15_RS15625
3545435
3546553
-
Genic
-1068
NZ_LR595896.1
3548141
3548156
AGCGCG
15
-
2
CGCGCT
UKMR15_RS15640
3548098
3550263
+
Genic
-43
NZ_LR595896.1
3549824
3549837
AACAAG
13
+
2
GAACAA
UKMR15_RS15640
3548098
3550263
+
Genic
-1726
NZ_LR595896.1
3549921
3549934
ACGCAG
13
+
2
ACGCAG
UKMR15_RS15640
3548098
3550263
+
Genic
-1823
NZ_LR595896.1
3553322
3553334
ACCGCG
12
+
2
ACCGCG
UKMR15_RS15655
3552504
3553772
+
Genic
-818
NZ_LR595896.1
3553811
3553823
ATCGGC
12
+
2
TCGGCA
UKMR15_RS15660
3553787
3556048
+
Genic
-24
NZ_LR595896.1
3555435
3555447
ACGTCG
12
+
2
CGTCGA
UKMR15_RS15660
3553787
3556048
+
Genic
-1648