Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5351 to 5375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3566184
3566196
ACACGC
12
-
2
GCGTGT
tssA
3565935
3567056
-
Genic
-249
NZ_LR595896.1
3566383
3566397
CCCG
14
+
3
CGCC
tssA
3565935
3567056
-
Genic
-448
NZ_LR595896.1
3567893
3567908
AGCGCG
15
+
2
GCGAGC
tssH
3567146
3569815
-
Genic
-747
NZ_LR595896.1
3567906
3567918
ACCGAG
12
-
2
CGGTCT
tssH
3567146
3569815
-
Genic
-760
NZ_LR595896.1
3567981
3567994
ACCGCG
13
-
2
TCGCGG
tssH
3567146
3569815
-
Genic
-835
NZ_LR595896.1
3568229
3568241
ACGCG
12
-
2
CGCGT
tssH
3567146
3569815
-
Genic
-1083
NZ_LR595896.1
3568515
3568527
AGCGCG
12
+
2
GCGCGA
tssH
3567146
3569815
-
Genic
-1369
NZ_LR595896.1
3569390
3569402
ACGCGC
12
+
2
ACGCGC
tssH
3567146
3569815
-
Genic
-2244
NZ_LR595896.1
3569935
3569947
CCCGCG
12
+
2
CGCGCC
tssG
3569849
3570949
-
Genic
-86
NZ_LR595896.1
3570168
3570180
AACGTG
12
-
2
TCACGT
tssG
3569849
3570949
-
Genic
-319
NZ_LR595896.1
3570585
3570597
AGCGGC
12
+
2
GCAGCG
tssG
3569849
3570949
-
Genic
-736
NZ_LR595896.1
3571503
3571516
ACGTCG
13
+
2
GTCGAC
tssF
3570913
3572751
-
Genic
-590
NZ_LR595896.1
3572989
3573002
ACCTGC
13
+
2
CACCTG
tssE
3572831
3573313
-
Genic
-158
NZ_LR595896.1
3573327
3573339
AACGGG
12
+
2
AACGGG
tssE
3572831
3573313
-
Intergenic
-496
NZ_LR595896.1
3575086
3575099
AAGATC
13
-
2
CTTGAT
tssC
3573947
3575437
-
Genic
-1139
NZ_LR595896.1
3575327
3575340
AATCCG
13
-
2
TCGGAT
tssC
3573947
3575437
-
Genic
-1380
NZ_LR595896.1
3576051
3576067
CCGGCG
16
+
2
GGCGCC
UKMR15_RS15740
3576009
3576680
-
Genic
-42
NZ_LR595896.1
3576079
3576091
CCCGCG
12
-
2
GCGCGG
UKMR15_RS15740
3576009
3576680
-
Genic
-70
NZ_LR595896.1
3576552
3576566
ACGCCG
14
-
2
GCGTCG
UKMR15_RS15740
3576009
3576680
-
Genic
-543
NZ_LR595896.1
3577273
3577285
AGCGCG
12
-
2
CGCTCG
tssJ
3577054
3577668
+
Genic
-219
NZ_LR595896.1
3578667
3578679
CCCGGG
12
+
2
CCGGGC
tssK
3577777
3579123
+
Genic
-890
NZ_LR595896.1
3579533
3579546
CCGCG
13
-
2
GGCGC
UKMR15_RS15755
3579120
3579905
+
Genic
-413
NZ_LR595896.1
3581694
3581706
AACGGC
12
+
2
CGGCAA
UKMR15_RS15770
3581461
3581877
-
Genic
-233
NZ_LR595896.1
3581804
3581816
AGCCGC
12
+
2
GCCGCA
UKMR15_RS15770
3581461
3581877
-
Genic
-343
NZ_LR595896.1
3582680
3582693
ACGCGC
13
+
2
GCGCAC
UKMR15_RS15780
3582366
3582692
-
Genic
-314