Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5376 to 5400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3585648
3585660
ACCACG
12
-
2
CGTGGT
UKMR15_RS15790
3583826
3586549
-
Genic
-1822
NZ_LR595896.1
3589883
3589898
AGGGCC
15
+
2
GGCCAG
UKMR15_RS15800
3588225
3591059
-
Genic
-1658
NZ_LR595896.1
3590327
3590339
AACAGG
12
+
2
CAGGAA
UKMR15_RS15800
3588225
3591059
-
Genic
-2102
NZ_LR595896.1
3590795
3590807
AAACGC
12
-
2
TTTGCG
UKMR15_RS15800
3588225
3591059
-
Genic
-2570
NZ_LR595896.1
3593241
3593254
AACATC
13
+
2
CATCAA
UKMR15_RS15810
3592796
3594175
-
Genic
-445
NZ_LR595896.1
3594479
3594491
AGCATG
12
-
2
GCTCAT
UKMR15_RS15815
3594172
3595068
-
Genic
-307
NZ_LR595896.1
3597205
3597219
AGCGGC
14
-
2
CGCTGC
UKMR15_RS15830
3597084
3598079
+
Genic
-121
NZ_LR595896.1
3598570
3598582
ACGAGG
12
+
2
GACGAG
UKMR15_RS15835
3598148
3599065
+
Genic
-422
NZ_LR595896.1
3599074
3599086
AGGGC
12
-
2
GCCCT
UKMR15_RS15840
3599062
3600033
+
Genic
-12
NZ_LR595896.1
3600366
3600378
AAACCG
12
+
2
ACCGAA
UKMR15_RS15845
3600134
3600394
+
Genic
-232
NZ_LR595896.1
3601560
3601573
AGGCG
13
+
2
GCGAG
UKMR15_RS15860
3601333
3602100
-
Genic
-227
NZ_LR595896.1
3606190
3606202
AGGCCG
12
-
2
CCTCGG
UKMR15_RS15880
3605572
3607551
+
Genic
-618
NZ_LR595896.1
3607402
3607414
ACGGCG
12
-
2
CGCCGT
UKMR15_RS15880
3605572
3607551
+
Genic
-1830
NZ_LR595896.1
3609022
3609034
ACGGGC
12
-
2
GCCCGT
UKMR15_RS15890
3608201
3610087
-
Genic
-821
NZ_LR595896.1
3609311
3609323
AAGATG
12
+
2
ATGAAG
UKMR15_RS15890
3608201
3610087
-
Genic
-1110
NZ_LR595896.1
3611805
3611817
ACAT
12
+
3
ATAC
UKMR15_RS15895
3610232
3611413
-
Intergenic
-1573
NZ_LR595896.1
3612508
3612520
ACGCG
12
-
2
GCGTC
UKMR15_RS15900
3612297
3613274
-
Genic
-211
NZ_LR595896.1
3614741
3614753
ACGATG
12
-
2
TCATCG
UKMR15_RS15905
3613667
3615277
-
Genic
-1074
NZ_LR595896.1
3615708
3615722
CCGGCG
14
+
2
CCGGCG
UKMR15_RS15915
3615674
3616150
-
Genic
-34
NZ_LR595896.1
3615934
3615947
ACGTCC
13
+
2
CACGTC
UKMR15_RS15915
3615674
3616150
-
Genic
-260
NZ_LR595896.1
3618419
3618431
AAGACC
12
-
2
GGTCTT
UKMR15_RS15930
3618045
3619229
-
Genic
-374
NZ_LR595896.1
3619570
3619585
ATCGCC
15
+
2
TCGCCA
UKMR15_RS15940
3619522
3620043
-
Genic
-48
NZ_LR595896.1
3620054
3620066
AAACGG
12
+
2
AACGGA
UKMR15_RS15940
3619522
3620043
-
Intergenic
-532
NZ_LR595896.1
3620451
3620467
CG
16
+
8
GC
UKMR15_RS15945
3620113
3620724
-
Genic
-338
NZ_LR595896.1
3620491
3620503
ACCCGC
12
-
2
TGCGGG
UKMR15_RS15945
3620113
3620724
-
Genic
-378