Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5426 to 5450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3645108
3645120
AGCGCG
12
+
2
GCGAGC
thiE
3644391
3645494
-
Genic
-717
NZ_LR595896.1
3646451
3646465
ACCGCG
14
+
2
GACCGC
thiS
3646359
3646556
-
Genic
-92
NZ_LR595896.1
3646562
3646575
ACATCG
13
-
2
TGTCGA
thiS
3646359
3646556
-
Intergenic
-203
NZ_LR595896.1
3647599
3647614
AGCCCG
15
+
2
CCGAGC
UKMR15_RS16115
3646605
3647738
-
Genic
-994
NZ_LR595896.1
3647649
3647661
CCCGCG
12
+
2
CCCGCG
UKMR15_RS16115
3646605
3647738
-
Genic
-1044
NZ_LR595896.1
3648608
3648622
AACGCG
14
-
2
TCGCGT
UKMR15_RS16120
3648341
3650107
+
Genic
-267
NZ_LR595896.1
3648809
3648825
ACAGCG
16
-
2
CGCTGT
UKMR15_RS16120
3648341
3650107
+
Genic
-468
NZ_LR595896.1
3649060
3649072
ATCCGC
12
+
2
ATCCGC
UKMR15_RS16120
3648341
3650107
+
Genic
-719
NZ_LR595896.1
3649245
3649258
CCGCG
13
+
2
CGCCG
UKMR15_RS16120
3648341
3650107
+
Genic
-904
NZ_LR595896.1
3649600
3649612
AGCCGG
12
-
2
TCCGGC
UKMR15_RS16120
3648341
3650107
+
Genic
-1259
NZ_LR595896.1
3650122
3650159
AGAGCC
37
-
6
CTGGCT
UKMR15_RS16125
3650097
3650279
+
Genic
-25
NZ_LR595896.1
3650396
3650408
ACGCTC
12
-
2
GAGCGT
thpR
3650328
3650888
-
Genic
-68
NZ_LR595896.1
3650655
3650667
ACGTCG
12
+
2
TCGACG
thpR
3650328
3650888
-
Genic
-327
NZ_LR595896.1
3651063
3651075
AGCGCC
12
-
2
GCGCTG
thpR
3650328
3650888
-
Intergenic
-735
NZ_LR595896.1
3651243
3651255
CCGCG
12
+
2
CGCGC
thpR
3650328
3650888
-
Intergenic
-915
NZ_LR595896.1
3651533
3651545
ACCGCG
12
-
2
TCGCGG
thpR
3650328
3650888
-
Intergenic
-1205
NZ_LR595896.1
3651732
3651744
AGCGCG
12
+
2
CGCGAG
thpR
3650328
3650888
-
Intergenic
-1404
NZ_LR595896.1
3651939
3651951
ACAGCG
12
+
2
CAGCGA
UKMR15_RS16140
3652675
3654141
-
Intergenic
724
NZ_LR595896.1
3652098
3652110
ACATCC
12
+
2
CATCCA
UKMR15_RS16140
3652675
3654141
-
Intergenic
565
NZ_LR595896.1
3652305
3652317
CCCGCG
12
+
2
CGCGCC
UKMR15_RS16140
3652675
3654141
-
Intergenic
358
NZ_LR595896.1
3653360
3653372
ACCGGC
12
+
2
CCGGCA
UKMR15_RS16140
3652675
3654141
-
Genic
-685
NZ_LR595896.1
3654024
3654036
ACGCGG
12
-
2
CGCGTC
UKMR15_RS16140
3652675
3654141
-
Genic
-1349
NZ_LR595896.1
3655066
3655078
AAGGCG
12
-
2
GCCTTC
UKMR15_RS16145
3654235
3658938
-
Genic
-831
NZ_LR595896.1
3655681
3655695
AAGGCG
14
-
2
GCCTTC
UKMR15_RS16145
3654235
3658938
-
Genic
-1446
NZ_LR595896.1
3655823
3655835
CCG
12
-
4
GCG
UKMR15_RS16145
3654235
3658938
-
Genic
-1588