Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5476 to 5500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3675132
3675144
AACAAG
12
+
2
AACAAG
UKMR15_RS16220
3673741
3676134
+
Genic
-1391
NZ_LR595896.1
3675430
3675442
AAGCCG
12
-
2
GCTTCG
UKMR15_RS16220
3673741
3676134
+
Genic
-1689
NZ_LR595896.1
3675938
3675950
ATCGGC
12
-
2
GATGCC
UKMR15_RS16220
3673741
3676134
+
Genic
-2197
NZ_LR595896.1
3676189
3676201
AGCCG
12
-
2
GCTCG
cyaY
3676250
3676576
-
Intergenic
49
NZ_LR595896.1
3676447
3676460
ACGCTC
13
-
2
CGTGAG
cyaY
3676250
3676576
-
Genic
-197
NZ_LR595896.1
3677610
3677622
ACGTCG
12
+
2
ACGTCG
lysA
3676908
3678179
+
Genic
-702
NZ_LR595896.1
3677710
3677722
ACGGCC
12
+
2
CGGCCA
lysA
3676908
3678179
+
Genic
-802
NZ_LR595896.1
3678367
3678389
AGCCGC
22
+
3
GCCGCA
msrQ
3678438
3679163
-
Intergenic
49
NZ_LR595896.1
3678510
3678523
ACGAGC
13
+
2
AGCACG
msrQ
3678438
3679163
-
Genic
-72
NZ_LR595896.1
3680007
3680019
AGCGCG
12
+
2
GCGAGC
msrP
3679173
3680168
-
Genic
-834
NZ_LR595896.1
3680699
3680712
AACCGC
13
+
2
CGCAAC
ccsB
3680346
3681536
-
Genic
-353
NZ_LR595896.1
3681379
3681391
AGCGCG
12
+
2
GCGCGA
ccsB
3680346
3681536
-
Genic
-1033
NZ_LR595896.1
3681392
3681404
CCCGCG
12
+
2
GCCCGC
ccsB
3680346
3681536
-
Genic
-1046
NZ_LR595896.1
3681689
3681701
CCCGCG
12
+
2
CGCCCG
UKMR15_RS16255
3681541
3683718
-
Genic
-148
NZ_LR595896.1
3682031
3682044
AAGGAG
13
-
2
CCTTCT
UKMR15_RS16255
3681541
3683718
-
Genic
-490
NZ_LR595896.1
3682850
3682862
ACG
12
+
4
CGA
UKMR15_RS16255
3681541
3683718
-
Genic
-1309
NZ_LR595896.1
3683304
3683316
CG
12
+
6
CG
UKMR15_RS16255
3681541
3683718
-
Genic
-1763
NZ_LR595896.1
3683321
3683333
ACCGCG
12
+
2
CCGCGA
UKMR15_RS16255
3681541
3683718
-
Genic
-1780
NZ_LR595896.1
3683457
3683469
AGGATC
12
+
2
GATCAG
UKMR15_RS16255
3681541
3683718
-
Genic
-1916
NZ_LR595896.1
3685298
3685310
ACGCGC
12
+
2
ACGCGC
UKMR15_RS16265
3684713
3685372
+
Genic
-585
NZ_LR595896.1
3685435
3685447
ATCCGC
12
-
2
CGGATG
UKMR15_RS16265
3684713
3685372
+
Intergenic
-722
NZ_LR595896.1
3686401
3686413
ACCATG
12
-
2
CATGGT
hemB
3685656
3686654
+
Genic
-745
NZ_LR595896.1
3686583
3686595
CCCGCG
12
-
2
GCGCGG
hemB
3685656
3686654
+
Genic
-927
NZ_LR595896.1
3686711
3686724
AAAACG
13
+
2
GAAAAC
hemB
3685656
3686654
+
Intergenic
-1055
NZ_LR595896.1
3687449
3687461
CCG
12
-
4
GCG
dsbD
3686870
3688753
-
Genic
-579