Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5501 to 5525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3688522
3688534
AACGCG
12
+
2
CGCGAA
dsbD
3686870
3688753
-
Genic
-1652
NZ_LR595896.1
3689075
3689087
AGGCGG
12
-
2
CGCCTC
UKMR15_RS16280
3688746
3689072
-
Intergenic
-329
NZ_LR595896.1
3689404
3689416
ATCGCG
12
+
2
ATCGCG
rplQ
3689231
3689626
-
Genic
-173
NZ_LR595896.1
3689499
3689511
AAGGCG
12
-
2
CCTTCG
rplQ
3689231
3689626
-
Genic
-268
NZ_LR595896.1
3690428
3690441
AAGGCG
13
-
2
CGCCTT
rpoA
3689767
3690744
-
Genic
-661
NZ_LR595896.1
3691962
3691975
AACGTG
13
+
2
CGTGAA
rpsK
3691646
3692047
-
Genic
-316
NZ_LR595896.1
3692108
3692120
ACCCGC
12
-
2
TGCGGG
rpsM
3692071
3692436
-
Genic
-37
NZ_LR595896.1
3692124
3692137
ACGCGT
13
+
2
CGTACG
rpsM
3692071
3692436
-
Genic
-53
NZ_LR595896.1
3693383
3693395
AAGCTG
12
-
2
TTCAGC
secY
3692840
3694186
-
Genic
-543
NZ_LR595896.1
3694786
3694798
ACCCAG
12
+
2
CAGACC
rpmD
3694694
3694876
-
Genic
-92
NZ_LR595896.1
3695235
3695249
AAGGGC
14
-
2
CCTTGC
rpsE
3694892
3695410
-
Genic
-343
NZ_LR595896.1
3695525
3695537
AAGGCC
12
-
2
GGCCTT
rplR
3695424
3695789
-
Genic
-101
NZ_LR595896.1
3695852
3695865
AAGGGC
13
-
2
GCCCTT
rplF
3695802
3696332
-
Genic
-50
NZ_LR595896.1
3696647
3696659
AAGGTG
12
-
2
ACCTTC
rpsH
3696353
3696748
-
Genic
-294
NZ_LR595896.1
3697902
3697914
ACGATG
12
+
2
GATGAC
rplX
3697633
3697941
-
Genic
-269
NZ_LR595896.1
3700445
3700457
AAGATC
12
-
2
TCTTGA
rplV
3700333
3700662
-
Genic
-112
NZ_LR595896.1
3702857
3702869
ACCGTC
12
+
2
ACCGTC
rplC
3702722
3703381
-
Genic
-135
NZ_LR595896.1
3704481
3704494
AAATCG
13
-
2
CGATTT
tuf
3704033
3705223
-
Genic
-448
NZ_LR595896.1
3705266
3705278
AAGTCG
12
-
2
ACTTCG
fusA
3705265
3707367
-
Genic
-1
NZ_LR595896.1
3705516
3705528
AAGTCG
12
-
2
TTCGAC
fusA
3705265
3707367
-
Genic
-251
NZ_LR595896.1
3707175
3707187
ACGATC
12
-
2
CGTGAT
fusA
3705265
3707367
-
Genic
-1910
NZ_LR595896.1
3707287
3707299
ACG
12
-
4
GTC
fusA
3705265
3707367
-
Genic
-2022
NZ_LR595896.1
3707863
3707875
AGCATC
12
+
2
CAGCAT
rpsG
3707489
3707959
-
Genic
-374
NZ_LR595896.1
3708447
3708459
AAGAGC
12
-
2
GCTCTT
rpsL
3708130
3708510
-
Genic
-317
NZ_LR595896.1
3710037
3710049
ACCGCG
12
-
2
GCGGTC
recQ
3708726
3710573
-
Genic
-1311