Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5526 to 5550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3714165
3714178
ACCTGC
13
+
2
CACCTG
rpoC
3713299
3717537
-
Genic
-866
NZ_LR595896.1
3714873
3714885
ACGCGC
12
+
2
GCGCAC
rpoC
3713299
3717537
-
Genic
-1574
NZ_LR595896.1
3715091
3715103
ACG
12
+
4
CGA
rpoC
3713299
3717537
-
Genic
-1792
NZ_LR595896.1
3716532
3716545
AAGGGC
13
-
2
GCCCTT
rpoC
3713299
3717537
-
Genic
-3233
NZ_LR595896.1
3717573
3717585
ACATCG
12
-
2
GTCGAT
rpoB
3717559
3721665
-
Genic
-14
NZ_LR595896.1
3718619
3718631
ACCACT
12
-
2
AGTGGT
rpoB
3717559
3721665
-
Genic
-1060
NZ_LR595896.1
3720704
3720718
AACGCG
14
-
2
CGTTCG
rpoB
3717559
3721665
-
Genic
-3145
NZ_LR595896.1
3720968
3720980
AAGACG
12
+
2
CGAAGA
rpoB
3717559
3721665
-
Genic
-3409
NZ_LR595896.1
3722151
3722164
AGGCCC
13
+
2
CAGGCC
rplL
3722029
3722403
-
Genic
-122
NZ_LR595896.1
3723851
3723863
AGCGCG
12
-
2
TCGCGC
rplA
3723262
3723960
-
Genic
-589
NZ_LR595896.1
3724222
3724235
ACCGGC
13
+
2
ACCGGC
rplK
3723961
3724392
-
Genic
-261
NZ_LR595896.1
3724776
3724788
AGCCCG
12
-
2
TCGGGC
nusG
3724538
3725095
-
Genic
-238
NZ_LR595896.1
3724858
3724870
AAATGG
12
-
2
CATTTC
nusG
3724538
3725095
-
Genic
-320
NZ_LR595896.1
3726103
3726116
AAATCG
13
-
2
CGATTT
tuf
3725655
3726845
-
Genic
-448
NZ_LR595896.1
3727360
3727372
AATAGT
12
-
2
ATTACT
UKMR15_RS16530
3727124
3727209
-
Intergenic
-236
NZ_LR595896.1
3727586
3727600
AGGGCG
14
-
2
CGCCCT
rrf
3727969
3728082
-
Intergenic
369
NZ_LR595896.1
3727787
3727799
AAGCG
12
+
2
GCGAA
rrf
3727969
3728082
-
Intergenic
170
NZ_LR595896.1
3733856
3733868
CCG
12
+
4
GCC
UKMR15_RS16560
3733844
3735121
-
Genic
-12
NZ_LR595896.1
3734517
3734529
ACCGCC
12
+
2
CCGCCA
UKMR15_RS16560
3733844
3735121
-
Genic
-673
NZ_LR595896.1
3738361
3738373
CCGCG
12
+
2
GCCGC
paaJ
3737912
3738532
+
Genic
-449
NZ_LR595896.1
3738952
3738966
AGCTCG
14
+
2
GCTCGA
paaK
3738534
3739622
+
Genic
-418
NZ_LR595896.1
3742105
3742117
AACGGG
12
+
2
AACGGG
UKMR15_RS16600
3741442
3742089
+
Intergenic
-663
NZ_LR595896.1
3745178
3745192
ACGAGC
14
-
2
CGTGCT
UKMR15_RS16620
3744721
3748302
+
Genic
-457
NZ_LR595896.1
3746474
3746486
ACGATC
12
-
2
GATCGT
UKMR15_RS16620
3744721
3748302
+
Genic
-1753
NZ_LR595896.1
3746643
3746655
CCG
12
+
4
CGC
UKMR15_RS16620
3744721
3748302
+
Genic
-1922