Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5576 to 5600 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3761102
3761117
CCGCGG
15
+
2
CGCGGC
UKMR15_RS16670
3760552
3761820
+
Genic
-550
NZ_LR595896.1
3761354
3761366
AACGCG
12
-
2
GTTCGC
UKMR15_RS16670
3760552
3761820
+
Genic
-802
NZ_LR595896.1
3761529
3761546
AGCGCG
17
-
2
GCGCTC
UKMR15_RS16670
3760552
3761820
+
Genic
-977
NZ_LR595896.1
3762731
3762743
ACGGCC
12
-
2
GCCGTG
UKMR15_RS16680
3762678
3763547
-
Genic
-53
NZ_LR595896.1
3763070
3763082
AGCCG
12
+
2
CGAGC
UKMR15_RS16680
3762678
3763547
-
Genic
-392
NZ_LR595896.1
3763929
3763941
ACGCGC
12
-
2
TGCGCG
UKMR15_RS16685
3763674
3764429
+
Genic
-255
NZ_LR595896.1
3763937
3763950
CCGCG
13
+
2
CGCGC
UKMR15_RS16685
3763674
3764429
+
Genic
-263
NZ_LR595896.1
3764630
3764642
AAGGCG
12
-
2
CGCCTT
UKMR15_RS16690
3764583
3764813
-
Genic
-47
NZ_LR595896.1
3765011
3765023
AATTCG
12
+
2
AATTCG
UKMR15_RS16695
3765034
3765666
-
Intergenic
11
NZ_LR595896.1
3768759
3768772
AATTCG
13
+
2
CGAATT
UKMR15_RS16715
3768314
3769720
+
Genic
-445
NZ_LR595896.1
3768839
3768851
ATCGGC
12
+
2
TCGGCA
UKMR15_RS16715
3768314
3769720
+
Genic
-525
NZ_LR595896.1
3770786
3770798
CCG
12
+
4
CGC
UKMR15_RS16720
3770168
3770455
+
Intergenic
-618
NZ_LR595896.1
3774395
3774407
AAACCC
12
+
2
AACCCA
bcpO
3774369
3774590
-
Genic
-26
NZ_LR595896.1
3776950
3776962
ACGATG
12
-
2
TCGTCA
UKMR15_RS16745
3774960
3784331
-
Genic
-1990
NZ_LR595896.1
3777452
3777464
ACCTGC
12
+
2
CTGCAC
UKMR15_RS16745
3774960
3784331
-
Genic
-2492
NZ_LR595896.1
3777628
3777640
AGCCCG
12
+
2
GCCCGA
UKMR15_RS16745
3774960
3784331
-
Genic
-2668
NZ_LR595896.1
3778169
3778181
ACAGCC
12
-
2
GCTGTG
UKMR15_RS16745
3774960
3784331
-
Genic
-3209
NZ_LR595896.1
3778528
3778540
ACGCCG
12
+
2
CGCCGA
UKMR15_RS16745
3774960
3784331
-
Genic
-3568
NZ_LR595896.1
3779581
3779593
CCGGCG
12
+
2
CCGGCG
UKMR15_RS16745
3774960
3784331
-
Genic
-4621
NZ_LR595896.1
3779726
3779740
ACGCTG
14
+
2
GCTGAC
UKMR15_RS16745
3774960
3784331
-
Genic
-4766
NZ_LR595896.1
3780116
3780128
ACGGCG
12
-
2
CGTCGC
UKMR15_RS16745
3774960
3784331
-
Genic
-5156
NZ_LR595896.1
3781721
3781734
ACGCTG
13
-
2
CGTCAG
UKMR15_RS16745
3774960
3784331
-
Genic
-6761
NZ_LR595896.1
3782235
3782248
CCGGCG
13
+
2
GCGCCG
UKMR15_RS16745
3774960
3784331
-
Genic
-7275
NZ_LR595896.1
3784853
3784866
ACGCAT
13
-
2
GTATGC
UKMR15_RS16750
3785269
3785667
+
Intergenic
403
NZ_LR595896.1
3791052
3791065
AACCGC
13
-
2
TTGCGG
UKMR15_RS16775
3790521
3792416
+
Genic
-531