Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5626 to 5650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3817701
3817713
ACGGCC
12
+
2
CACGGC
UKMR15_RS16905
3817834
3818526
+
Intergenic
121
NZ_LR595896.1
3817999
3818011
AGCGCG
12
-
2
TCGCGC
UKMR15_RS16905
3817834
3818526
+
Genic
-165
NZ_LR595896.1
3818129
3818141
CCGCGG
12
+
2
CGCGGC
UKMR15_RS16905
3817834
3818526
+
Genic
-295
NZ_LR595896.1
3818281
3818293
ACGTCG
12
+
2
ACGTCG
UKMR15_RS16905
3817834
3818526
+
Genic
-447
NZ_LR595896.1
3820034
3820046
AGCGCG
12
-
2
TCGCGC
UKMR15_RS16910
3818621
3820111
+
Genic
-1413
NZ_LR595896.1
3820049
3820061
AGCTCG
12
+
2
AGCTCG
UKMR15_RS16910
3818621
3820111
+
Genic
-1428
NZ_LR595896.1
3820121
3820133
ACACTC
12
-
2
GAGTGT
UKMR15_RS16910
3818621
3820111
+
Intergenic
-1500
NZ_LR595896.1
3821455
3821467
AGCGCG
12
+
2
AGCGCG
UKMR15_RS16920
3821143
3821496
-
Genic
-312
NZ_LR595896.1
3822408
3822420
AACGTC
12
-
2
CGTTGA
UKMR15_RS16925
3821660
3823081
-
Genic
-748
NZ_LR595896.1
3822975
3822987
ACCGAG
12
-
2
TCTCGG
UKMR15_RS16925
3821660
3823081
-
Genic
-1315
NZ_LR595896.1
3824251
3824264
ACCCGG
13
+
2
CCCGGA
UKMR15_RS16935
3824191
3825003
-
Genic
-60
NZ_LR595896.1
3824310
3824324
CCG
14
+
4
CGC
UKMR15_RS16935
3824191
3825003
-
Genic
-119
NZ_LR595896.1
3824513
3824525
ACGCGC
12
-
2
GCGCGT
UKMR15_RS16935
3824191
3825003
-
Genic
-322
NZ_LR595896.1
3825488
3825500
AGCGCG
12
+
2
GCGAGC
UKMR15_RS16935
3824191
3825003
-
Intergenic
-1297
NZ_LR595896.1
3825659
3825671
ACG
12
-
4
GTC
UKMR15_RS16935
3824191
3825003
-
Intergenic
-1468
NZ_LR595896.1
3825906
3825918
AGCGCC
12
-
2
GGCGCT
flhA
3826743
3828845
-
Intergenic
825
NZ_LR595896.1
3827044
3827056
CCCGCG
12
+
2
CGCCCG
flhA
3826743
3828845
-
Genic
-301
NZ_LR595896.1
3828721
3828734
AGCGGC
13
+
2
GCGGCA
flhA
3826743
3828845
-
Genic
-1978
NZ_LR595896.1
3829713
3829725
ATCGCC
12
+
2
CCATCG
flhB
3828842
3830047
-
Genic
-871
NZ_LR595896.1
3830482
3830494
ACGCCG
12
+
2
CGACGC
UKMR15_RS16955
3830754
3831254
-
Intergenic
260
NZ_LR595896.1
3831094
3831106
AGGGCG
12
-
2
CGCCCT
UKMR15_RS16955
3830754
3831254
-
Genic
-340
NZ_LR595896.1
3831616
3831628
AGATCG
12
+
2
GATCGA
UKMR15_RS16960
3831443
3832738
-
Genic
-173
NZ_LR595896.1
3832606
3832619
ACCGGC
13
-
2
GCCGGT
UKMR15_RS16960
3831443
3832738
-
Genic
-1163
NZ_LR595896.1
3832644
3832659
CCG
15
+
5
CGC
UKMR15_RS16960
3831443
3832738
-
Genic
-1201
NZ_LR595896.1
3835580
3835592
CCGCGG
12
+
2
CGCGGC
UKMR15_RS16980
3834936
3836030
-
Genic
-644