Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5676 to 5700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3855289
3855302
ACGGGC
13
+
2
GGCACG
UKMR15_RS17075
3854570
3855736
+
Genic
-719
NZ_LR595896.1
3856307
3856319
ACCGGC
12
+
2
CGGCAC
fliD
3855886
3857406
+
Genic
-421
NZ_LR595896.1
3856317
3856330
ACGCTG
13
+
2
ACGCTG
fliD
3855886
3857406
+
Genic
-431
NZ_LR595896.1
3856350
3856362
AGATCG
12
-
2
TCGATC
fliD
3855886
3857406
+
Genic
-464
NZ_LR595896.1
3857025
3857037
ACG
12
-
4
TCG
fliD
3855886
3857406
+
Genic
-1139
NZ_LR595896.1
3857585
3857597
AGCGCG
12
-
2
CGCTCG
fliT
3857420
3857734
+
Genic
-165
NZ_LR595896.1
3857631
3857643
AACGCG
12
+
2
CGCGAA
fliT
3857420
3857734
+
Genic
-211
NZ_LR595896.1
3858726
3858738
ACGCCG
12
+
2
CGCCGA
UKMR15_RS17090
3857957
3860287
+
Genic
-769
NZ_LR595896.1
3860500
3860512
AGCGCG
12
-
2
CGCTCG
vioA
3860284
3861432
+
Genic
-216
NZ_LR595896.1
3861933
3861945
AGCGCG
12
+
2
GCGCGA
UKMR15_RS17100
3861429
3862463
+
Genic
-504
NZ_LR595896.1
3862189
3862202
AGCGCG
13
-
2
GCTCGC
UKMR15_RS17100
3861429
3862463
+
Genic
-760
NZ_LR595896.1
3862350
3862362
AGCGCG
12
-
2
CGCTCG
UKMR15_RS17100
3861429
3862463
+
Genic
-921
NZ_LR595896.1
3862536
3862550
AGCGCG
14
-
2
CGCGCT
UKMR15_RS17105
3862475
3862696
+
Genic
-61
NZ_LR595896.1
3863679
3863691
AAGCCG
12
-
2
TTCGGC
UKMR15_RS17110
3862699
3863763
+
Genic
-980
NZ_LR595896.1
3863840
3863855
ATCGCG
15
+
2
GCGATC
UKMR15_RS17115
3863766
3864524
+
Genic
-74
NZ_LR595896.1
3863963
3863976
ACGCGG
13
+
2
GACGCG
UKMR15_RS17115
3863766
3864524
+
Genic
-197
NZ_LR595896.1
3864073
3864085
AGGCGC
12
+
2
GGCGCA
UKMR15_RS17115
3863766
3864524
+
Genic
-307
NZ_LR595896.1
3864286
3864298
CCGCG
12
+
2
CGCGC
UKMR15_RS17115
3863766
3864524
+
Genic
-520
NZ_LR595896.1
3864433
3864445
CCGCGG
12
+
2
CGCGGC
UKMR15_RS17115
3863766
3864524
+
Genic
-667
NZ_LR595896.1
3865062
3865074
CCGGCG
12
+
2
CGGCGC
UKMR15_RS17120
3864524
3865156
+
Genic
-538
NZ_LR595896.1
3865916
3865929
CCG
13
-
4
GGC
UKMR15_RS17125
3865158
3866222
+
Genic
-758
NZ_LR595896.1
3867502
3867514
AAACGG
12
-
2
TTTCCG
UKMR15_RS17135
3867364
3867666
-
Genic
-138
NZ_LR595896.1
3867923
3867935
AATAC
12
-
2
ATTGT
UKMR15_RS17135
3867364
3867666
-
Intergenic
-559
NZ_LR595896.1
3868027
3868039
ATCGGC
12
+
2
GCATCG
UKMR15_RS17140
3868322
3868945
+
Intergenic
283
NZ_LR595896.1
3868036
3868048
AGCGCG
12
-
2
TCGCGC
UKMR15_RS17140
3868322
3868945
+
Intergenic
274