Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5651 to 5675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3835624
3835636
CG
12
+
6
CG
UKMR15_RS16980
3834936
3836030
-
Genic
-688
NZ_LR595896.1
3836784
3836796
CCGCG
12
-
2
GCGCG
UKMR15_RS16990
3836737
3837684
-
Genic
-47
NZ_LR595896.1
3837875
3837887
CCGCGG
12
+
2
CGGCCG
UKMR15_RS16995
3837688
3839709
-
Genic
-187
NZ_LR595896.1
3838215
3838230
CCGCGG
15
+
2
CGCGGC
UKMR15_RS16995
3837688
3839709
-
Genic
-527
NZ_LR595896.1
3839282
3839296
CCCGCG
14
+
2
CGCCCG
UKMR15_RS16995
3837688
3839709
-
Genic
-1594
NZ_LR595896.1
3839620
3839632
AGCCCG
12
+
2
AGCCCG
UKMR15_RS16995
3837688
3839709
-
Genic
-1932
NZ_LR595896.1
3839724
3839736
AACGC
12
-
2
GTTGC
cheW
3839750
3840277
-
Intergenic
14
NZ_LR595896.1
3840621
3840635
ACGCGC
14
+
2
CGCGCA
cheA
3840308
3842605
-
Genic
-313
NZ_LR595896.1
3841482
3841494
ACGCCG
12
+
2
CGACGC
cheA
3840308
3842605
-
Genic
-1174
NZ_LR595896.1
3841761
3841773
CCCGCG
12
+
2
CGCCCG
cheA
3840308
3842605
-
Genic
-1453
NZ_LR595896.1
3842251
3842263
CCGCGG
12
+
2
CGCGGC
cheA
3840308
3842605
-
Genic
-1943
NZ_LR595896.1
3843161
3843175
ACG
14
-
4
CGT
motB
3843048
3844070
-
Genic
-113
NZ_LR595896.1
3843694
3843707
AGGCGC
13
-
2
CCTGCG
motB
3843048
3844070
-
Genic
-646
NZ_LR595896.1
3844054
3844066
AAGGGC
12
-
2
CCTTGC
motB
3843048
3844070
-
Genic
-1006
NZ_LR595896.1
3844467
3844479
AAGGCG
12
-
2
GCCTTC
motA
3844087
3844947
-
Genic
-380
NZ_LR595896.1
3844656
3844669
ACGCTC
13
-
2
GAGCGT
motA
3844087
3844947
-
Genic
-569
NZ_LR595896.1
3845119
3845132
CCGG
13
+
3
CCGG
flhC
3845141
3845692
-
Intergenic
9
NZ_LR595896.1
3845244
3845258
ACACGC
14
-
2
CGTGTG
flhC
3845141
3845692
-
Genic
-103
NZ_LR595896.1
3845896
3845909
AAGCGG
13
+
2
GAAGCG
flhD
3845786
3846454
-
Genic
-110
NZ_LR595896.1
3847996
3848009
CCGCG
13
+
2
GCCGC
UKMR15_RS17040
3847868
3848164
-
Genic
-128
NZ_LR595896.1
3848962
3848974
ATCGCG
12
+
2
CGATCG
aqpZ
3848470
3849174
+
Genic
-492
NZ_LR595896.1
3852604
3852616
ACCGGC
12
-
2
GTGCCG
UKMR15_RS17060
3851764
3852699
-
Genic
-840
NZ_LR595896.1
3853411
3853423
ACGCGG
12
+
2
GACGCG
UKMR15_RS17065
3852805
3853413
+
Genic
-606
NZ_LR595896.1
3853868
3853881
AAGCGC
13
-
2
CTTGCG
UKMR15_RS17070
3853800
3854012
-
Genic
-68
NZ_LR595896.1
3854762
3854774
AACGCG
12
+
2
CGAACG
UKMR15_RS17075
3854570
3855736
+
Genic
-192