Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5701 to 5725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3868137
3868150
CG
13
+
6
GC
UKMR15_RS17140
3868322
3868945
+
Intergenic
172
NZ_LR595896.1
3868498
3868510
CCCGCG
12
-
2
GGCGCG
UKMR15_RS17140
3868322
3868945
+
Genic
-176
NZ_LR595896.1
3870772
3870785
CCGCG
13
-
2
GCGCG
UKMR15_RS17145
3869246
3870907
-
Genic
-1526
NZ_LR595896.1
3871294
3871307
CCCCG
13
+
2
CGCCC
UKMR15_RS17150
3870904
3871395
-
Genic
-390
NZ_LR595896.1
3871699
3871712
ACGCGG
13
+
2
CGCGGA
UKMR15_RS17155
3871439
3872113
-
Genic
-260
NZ_LR595896.1
3872137
3872154
AAACCC
17
-
2
GTTTGG
UKMR15_RS17160
3872122
3872550
-
Genic
-15
NZ_LR595896.1
3872552
3872564
AACGAC
12
-
2
TTGTCG
UKMR15_RS17160
3872122
3872550
-
Intergenic
-430
NZ_LR595896.1
3873359
3873372
CCGCG
13
+
2
CGCCG
UKMR15_RS17165
3872610
3873287
-
Intergenic
-749
NZ_LR595896.1
3873369
3873381
AACGCG
12
+
2
CGCGAA
UKMR15_RS17165
3872610
3873287
-
Intergenic
-759
NZ_LR595896.1
3874566
3874578
ACATCG
12
+
2
TCGACA
UKMR15_RS17175
3874320
3875141
+
Genic
-246
NZ_LR595896.1
3874693
3874705
ACGCG
12
+
2
CGACG
UKMR15_RS17175
3874320
3875141
+
Genic
-373
NZ_LR595896.1
3875118
3875131
CCGCG
13
-
2
GGCGC
UKMR15_RS17175
3874320
3875141
+
Genic
-798
NZ_LR595896.1
3875257
3875270
CCGCGG
13
+
2
GCGGCC
UKMR15_RS17180
3875194
3876999
-
Genic
-63
NZ_LR595896.1
3875518
3875532
AGCGC
14
-
2
GCGCT
UKMR15_RS17180
3875194
3876999
-
Genic
-324
NZ_LR595896.1
3875734
3875747
ACGCG
13
+
2
CGCGA
UKMR15_RS17180
3875194
3876999
-
Genic
-540
NZ_LR595896.1
3876253
3876265
CG
12
+
6
GC
UKMR15_RS17180
3875194
3876999
-
Genic
-1059
NZ_LR595896.1
3878989
3879004
CCGCG
15
-
3
GCGCG
UKMR15_RS17190
3877280
3878941
-
Intergenic
-1709
NZ_LR595896.1
3880568
3880580
AGCGCG
12
-
2
GCTCGC
UKMR15_RS17200
3880674
3880922
-
Intergenic
94
NZ_LR595896.1
3882453
3882465
ACGATG
12
+
2
TGACGA
UKMR15_RS17215
3882158
3882610
-
Genic
-295
NZ_LR595896.1
3882895
3882907
AACGTC
12
+
2
AACGTC
UKMR15_RS17215
3882158
3882610
-
Intergenic
-737
NZ_LR595896.1
3888931
3888943
CCG
12
+
4
CGC
UKMR15_RS17260
3888405
3889304
+
Genic
-526
NZ_LR595896.1
3889304
3889316
CCCCG
12
+
2
CCCGC
UKMR15_RS17260
3888405
3889304
+
Genic
-899
NZ_LR595896.1
3889493
3889506
ACCGC
13
+
2
CGCAC
UKMR15_RS17265
3889627
3891714
-
Intergenic
121
NZ_LR595896.1
3889800
3889812
AGCGC
12
-
2
GCTGC
UKMR15_RS17265
3889627
3891714
-
Genic
-173
NZ_LR595896.1
3890447
3890459
CCGCG
12
-
2
CGCGG
UKMR15_RS17265
3889627
3891714
-
Genic
-820