Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5751 to 5775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3909856
3909869
ACGGCG
13
-
2
CGCCGT
UKMR15_RS17330
3908898
3909926
-
Genic
-958
NZ_LR595896.1
3909944
3909956
AAGCTG
12
+
2
GCTGAA
UKMR15_RS17335
3909970
3910149
-
Intergenic
14
NZ_LR595896.1
3910128
3910140
CCGCG
12
-
2
CGCGG
UKMR15_RS17335
3909970
3910149
-
Genic
-158
NZ_LR595896.1
3910513
3910525
ACGGCG
12
-
2
TCGCCG
UKMR15_RS17340
3910222
3911742
+
Genic
-291
NZ_LR595896.1
3911284
3911296
ACATCG
12
+
2
ACATCG
UKMR15_RS17340
3910222
3911742
+
Genic
-1062
NZ_LR595896.1
3912720
3912732
AGCGGC
12
+
2
GCAGCG
eutC
3912317
3913120
-
Genic
-403
NZ_LR595896.1
3912950
3912962
ATCGGC
12
+
2
GCATCG
eutC
3912317
3913120
-
Genic
-633
NZ_LR595896.1
3913690
3913702
AGCGCC
12
+
2
AGCGCC
UKMR15_RS17355
3913117
3914514
-
Genic
-573
NZ_LR595896.1
3917331
3917343
ACGGCG
12
-
2
CGTCGC
UKMR15_RS17370
3916598
3917776
+
Genic
-733
NZ_LR595896.1
3917664
3917676
AGCGCG
12
-
2
CGCGCT
UKMR15_RS17370
3916598
3917776
+
Genic
-1066
NZ_LR595896.1
3918829
3918841
AACACG
12
+
2
CACGAA
UKMR15_RS17380
3918149
3919612
-
Genic
-680
NZ_LR595896.1
3919260
3919272
CCGCG
12
+
2
GCGCC
UKMR15_RS17380
3918149
3919612
-
Genic
-1111
NZ_LR595896.1
3920268
3920280
ATCGGC
12
+
2
CGGCAT
UKMR15_RS17385
3920542
3920955
-
Intergenic
262
NZ_LR595896.1
3920856
3920868
ATGGCC
12
+
2
GCCATG
UKMR15_RS17385
3920542
3920955
-
Genic
-314
NZ_LR595896.1
3922605
3922618
ACCATC
13
+
2
CACCAT
UKMR15_RS17390
3920968
3923448
-
Genic
-1637
NZ_LR595896.1
3922753
3922768
AGCGCG
15
+
2
GCGAGC
UKMR15_RS17390
3920968
3923448
-
Genic
-1785
NZ_LR595896.1
3922812
3922824
CCG
12
+
4
CGC
UKMR15_RS17390
3920968
3923448
-
Genic
-1844
NZ_LR595896.1
3922829
3922841
ACCGCG
12
+
2
CCGCGA
UKMR15_RS17390
3920968
3923448
-
Genic
-1861
NZ_LR595896.1
3923184
3923220
ACCACG
36
-
6
GTCGTG
UKMR15_RS17390
3920968
3923448
-
Genic
-2216
NZ_LR595896.1
3925264
3925276
AGGCGC
12
-
2
CGCCTG
UKMR15_RS17410
3925037
3925279
+
Genic
-227
NZ_LR595896.1
3925722
3925735
ACATCG
13
-
2
GATGTC
UKMR15_RS17420
3925711
3926505
-
Genic
-11
NZ_LR595896.1
3926027
3926040
CCCGCG
13
+
2
CGCCCG
UKMR15_RS17420
3925711
3926505
-
Genic
-316
NZ_LR595896.1
3926434
3926446
CCGCG
12
+
2
CGCGC
UKMR15_RS17420
3925711
3926505
-
Genic
-723
NZ_LR595896.1
3927412
3927426
AGCGCG
14
-
2
CGCTCG
UKMR15_RS17425
3926559
3927713
-
Genic
-853
NZ_LR595896.1
3929039
3929052
CCGCG
13
+
2
CGCCG
UKMR15_RS17435
3928660
3929358
-
Genic
-379