Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5776 to 5800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3929295
3929309
AGCCGC
14
-
2
CGGCTG
UKMR15_RS17435
3928660
3929358
-
Genic
-635
NZ_LR595896.1
3929941
3929953
ATGCCC
12
-
2
GGCATG
UKMR15_RS17440
3929408
3931048
+
Genic
-533
NZ_LR595896.1
3930466
3930481
AGCGCG
15
-
2
GCGCTC
UKMR15_RS17440
3929408
3931048
+
Genic
-1058
NZ_LR595896.1
3931714
3931726
AGCGCG
12
-
2
CGCGCT
UKMR15_RS17445
3931164
3932711
+
Genic
-550
NZ_LR595896.1
3931735
3931748
AGCGCG
13
+
2
CGAGCG
UKMR15_RS17445
3931164
3932711
+
Genic
-571
NZ_LR595896.1
3932039
3932051
AAGCG
12
+
2
CGAAG
UKMR15_RS17445
3931164
3932711
+
Genic
-875
NZ_LR595896.1
3932566
3932578
ACGCCG
12
+
2
CGACGC
UKMR15_RS17445
3931164
3932711
+
Genic
-1402
NZ_LR595896.1
3932880
3932892
ACATCG
12
+
2
CATCGA
UKMR15_RS17450
3932943
3934082
-
Intergenic
51
NZ_LR595896.1
3933137
3933149
ATCGCC
12
+
2
CATCGC
UKMR15_RS17450
3932943
3934082
-
Genic
-194
NZ_LR595896.1
3934519
3934531
CG
12
+
6
GC
putA
3934167
3938096
-
Genic
-352
NZ_LR595896.1
3935235
3935247
ACGCCG
12
-
2
GCGTCG
putA
3934167
3938096
-
Genic
-1068
NZ_LR595896.1
3936143
3936156
CCGCG
13
-
2
GCGCG
putA
3934167
3938096
-
Genic
-1976
NZ_LR595896.1
3936182
3936194
CCGCG
12
-
2
CGGCG
putA
3934167
3938096
-
Genic
-2015
NZ_LR595896.1
3938378
3938391
ATCC
13
-
3
GATG
UKMR15_RS17460
3938380
3938550
+
Genic
2
NZ_LR595896.1
3939248
3939261
AGCGCG
13
+
2
GCGAGC
UKMR15_RS17465
3938561
3940828
-
Genic
-687
NZ_LR595896.1
3939556
3939570
CCCGCG
14
+
2
CCCGCG
UKMR15_RS17465
3938561
3940828
-
Genic
-995
NZ_LR595896.1
3940404
3940418
CCGCG
14
+
2
GCGCC
UKMR15_RS17465
3938561
3940828
-
Genic
-1843
NZ_LR595896.1
3942231
3942245
CG
14
+
7
CG
UKMR15_RS17470
3941269
3942363
-
Genic
-962
NZ_LR595896.1
3942522
3942534
AGCGCG
12
-
2
GCTCGC
UKMR15_RS17475
3942503
3943288
+
Genic
-19
NZ_LR595896.1
3942690
3942705
ACATCG
15
+
2
CATCGA
UKMR15_RS17475
3942503
3943288
+
Genic
-187
NZ_LR595896.1
3945521
3945533
CCCG
12
+
3
CCGC
UKMR15_RS17490
3944389
3946119
-
Genic
-1132
NZ_LR595896.1
3945777
3945789
AATGTC
12
-
2
ATTGAC
UKMR15_RS17490
3944389
3946119
-
Genic
-1388
NZ_LR595896.1
3946586
3946598
AACACG
12
+
2
ACGAAC
UKMR15_RS17495
3946352
3946777
-
Genic
-234
NZ_LR595896.1
3949483
3949495
CCCGCG
12
-
2
GGCGCG
atpG
3948587
3949462
-
Intergenic
-896
NZ_LR595896.1
3950387
3950400
ACGCCG
13
+
2
CCGACG
UKMR15_RS17510
3949534
3951075
-
Genic
-853