Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5801 to 5825 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3951804
3951816
AAGCGG
12
-
2
TTCCGC
UKMR15_RS17520
3951664
3952134
-
Genic
-140
NZ_LR595896.1
3951895
3951907
ACGCCG
12
-
2
TCGGCG
UKMR15_RS17520
3951664
3952134
-
Genic
-231
NZ_LR595896.1
3952437
3952449
ACCGAT
12
+
2
CGATAC
atpE
3952262
3952531
-
Genic
-175
NZ_LR595896.1
3952955
3952967
AAGATC
12
-
2
CTTGAT
atpB
3952608
3953459
-
Genic
-347
NZ_LR595896.1
3954977
3954989
AGCGCG
12
+
2
CGAGCG
UKMR15_RS17540
3954373
3955506
-
Genic
-604
NZ_LR595896.1
3955123
3955135
AACGGC
12
+
2
AACGGC
UKMR15_RS17540
3954373
3955506
-
Genic
-750
NZ_LR595896.1
3956048
3956060
CCGCGG
12
+
2
GCGGCC
UKMR15_RS17545
3955514
3956401
-
Genic
-534
NZ_LR595896.1
3956846
3956858
AATCGT
12
+
2
AATCGT
UKMR15_RS17550
3956437
3957207
-
Genic
-409
NZ_LR595896.1
3957147
3957160
ACG
13
-
4
CGT
UKMR15_RS17550
3956437
3957207
-
Genic
-710
NZ_LR595896.1
3962417
3962431
ACGCCG
14
+
2
CGCCGA
UKMR15_RS17570
3960847
3962631
-
Genic
-1570
NZ_LR595896.1
3962548
3962560
CCGCG
12
+
2
CGCGC
UKMR15_RS17570
3960847
3962631
-
Genic
-1701
NZ_LR595896.1
3962952
3962964
ATCGGC
12
-
2
TGCCGA
UKMR15_RS17575
3962636
3963691
-
Genic
-316
NZ_LR595896.1
3963170
3963183
AGCCCG
13
+
2
AGCCCG
UKMR15_RS17575
3962636
3963691
-
Genic
-534
NZ_LR595896.1
3963214
3963227
AGC
13
+
4
CAG
UKMR15_RS17575
3962636
3963691
-
Genic
-578
NZ_LR595896.1
3964050
3964062
CG
12
+
6
CG
UKMR15_RS17580
3964004
3965161
-
Genic
-46
NZ_LR595896.1
3965150
3965162
AAAATG
12
-
2
TTCATT
UKMR15_RS17580
3964004
3965161
-
Genic
-1146
NZ_LR595896.1
3967606
3967619
ACGCGC
13
+
2
GCACGC
UKMR15_RS17590
3967127
3968101
-
Genic
-479
NZ_LR595896.1
3968762
3968774
ACGAGC
12
+
2
CGAGCA
UKMR15_RS17595
3968101
3968985
-
Genic
-661
NZ_LR595896.1
3969311
3969323
AAGATG
12
-
2
ATCTTC
UKMR15_RS17600
3969125
3970321
-
Genic
-186
NZ_LR595896.1
3969936
3969949
CCCGCG
13
+
2
CCGCGC
UKMR15_RS17600
3969125
3970321
-
Genic
-811
NZ_LR595896.1
3971072
3971088
AGCGCG
16
+
2
CGCGAG
UKMR15_RS17605
3970389
3971144
-
Genic
-683
NZ_LR595896.1
3971670
3971683
CCGCG
13
+
2
CGCCG
UKMR15_RS17610
3971141
3971920
-
Genic
-529
NZ_LR595896.1
3972595
3972607
ACGCGC
12
+
2
CGCGCA
UKMR15_RS17615
3972420
3974105
-
Genic
-175
NZ_LR595896.1
3973369
3973381
CCG
12
+
4
CGC
UKMR15_RS17615
3972420
3974105
-
Genic
-949
NZ_LR595896.1
3974904
3974918
ACCGCG
14
+
2
ACCGCG
UKMR15_RS17620
3974280
3975806
-
Genic
-624