Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5826 to 5850 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3975554
3975567
AACTTG
13
+
2
CTTGAA
UKMR15_RS17620
3974280
3975806
-
Genic
-1274
NZ_LR595896.1
3975819
3975832
AACGGC
13
-
2
GTTGCC
UKMR15_RS17620
3974280
3975806
-
Intergenic
-1539
NZ_LR595896.1
3975973
3975985
ACCGCG
12
-
2
GTCGCG
UKMR15_RS17625
3975947
3976846
+
Genic
-26
NZ_LR595896.1
3976708
3976724
ACGCGC
16
+
2
GCGCAC
UKMR15_RS17625
3975947
3976846
+
Genic
-761
NZ_LR595896.1
3976991
3977004
CCGCG
13
-
2
CGCGG
UKMR15_RS17625
3975947
3976846
+
Intergenic
-1044
NZ_LR595896.1
3977714
3977726
ACCGCG
12
-
2
GTCGCG
UKMR15_RS17630
3977238
3977768
+
Genic
-476
NZ_LR595896.1
3977901
3977913
AGCGGC
12
+
2
AGCGGC
UKMR15_RS17635
3977868
3978359
-
Genic
-33
NZ_LR595896.1
3978165
3978178
AGCCCG
13
+
2
CCGAGC
UKMR15_RS17635
3977868
3978359
-
Genic
-297
NZ_LR595896.1
3979002
3979015
AGCGCG
13
-
2
CGCGCT
UKMR15_RS17640
3978386
3979396
+
Genic
-616
NZ_LR595896.1
3980011
3980024
AACTCG
13
-
2
GAGTTC
UKMR15_RS17650
3979868
3980098
-
Genic
-143
NZ_LR595896.1
3980706
3980718
AGC
12
-
4
TGC
UKMR15_RS17655
3980220
3980912
+
Genic
-486
NZ_LR595896.1
3981155
3981167
AGCG
12
-
3
TCGC
UKMR15_RS17660
3981019
3982503
+
Genic
-136
NZ_LR595896.1
3981192
3981204
AGATCC
12
+
2
CAGATC
UKMR15_RS17660
3981019
3982503
+
Genic
-173
NZ_LR595896.1
3981524
3981542
AGC
18
-
6
GCT
UKMR15_RS17660
3981019
3982503
+
Genic
-505
NZ_LR595896.1
3981948
3981960
ACATCG
12
-
2
GTCGAT
UKMR15_RS17660
3981019
3982503
+
Genic
-929
NZ_LR595896.1
3982335
3982348
AGGCCG
13
-
2
GGCCTC
UKMR15_RS17660
3981019
3982503
+
Genic
-1316
NZ_LR595896.1
3983479
3983491
AAACTG
12
+
2
TGAAAC
UKMR15_RS17670
3983452
3983718
-
Genic
-27
NZ_LR595896.1
3984098
3984111
AATCGC
13
+
2
CAATCG
UKMR15_RS17675
3983765
3984877
-
Genic
-333
NZ_LR595896.1
3984435
3984447
AGCGCG
12
+
2
CGAGCG
UKMR15_RS17675
3983765
3984877
-
Genic
-670
NZ_LR595896.1
3986942
3986954
ACGTAT
12
+
2
ATACGT
UKMR15_RS17690
3986448
3986711
+
Intergenic
-494
NZ_LR595896.1
3986959
3986971
AAACCT
12
+
2
TAAACC
UKMR15_RS17690
3986448
3986711
+
Intergenic
-511
NZ_LR595897.1
555
568
AAAATG
13
+
2
GAAAAT
UKMR15_RS17695
1
1188
+
Genic
-554
NZ_LR595897.1
1058
1070
ACGGCG
12
+
2
CGGCGA
UKMR15_RS17695
1
1188
+
Genic
-1057
NZ_LR595897.1
1155
1167
CCG
12
+
4
GCC
UKMR15_RS17695
1
1188
+
Genic
-1154
NZ_LR595897.1
2725
2737
AGGCCG
12
-
2
GCCTCG
UKMR15_RS17705
2488
2868
-
Genic
-237