Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5851 to 5875 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
6363
6376
ACGCGC
13
+
2
GCGCAC
UKMR15_RS17725
6319
6972
-
Genic
-44
NZ_LR595897.1
11357
11371
AAGCCG
14
-
2
GCTTCG
UKMR15_RS17750
11054
11971
+
Genic
-303
NZ_LR595897.1
12407
12421
AAGGCG
14
-
2
CCTTCG
UKMR15_RS17755
12548
13225
+
Intergenic
127
NZ_LR595897.1
14805
14817
CCG
12
+
4
CGC
UKMR15_RS17770
14508
14972
-
Genic
-297
NZ_LR595897.1
15497
15509
CCGCG
12
-
2
CGCGG
UKMR15_RS17775
15052
16290
-
Genic
-445
NZ_LR595897.1
16978
16990
CCCGCG
12
+
2
CCGCGC
UKMR15_RS17780
16287
17072
-
Genic
-691
NZ_LR595897.1
17148
17160
AGGCCG
12
+
2
GCCGAG
UKMR15_RS17785
17119
17859
-
Genic
-29
NZ_LR595897.1
18434
18446
AGC
12
-
4
CTG
UKMR15_RS17790
18318
18914
+
Genic
-116
NZ_LR595897.1
18510
18528
AGCGCG
18
-
3
TCGCGC
UKMR15_RS17790
18318
18914
+
Genic
-192
NZ_LR595897.1
18570
18582
ATCGGC
12
+
2
TCGGCA
UKMR15_RS17790
18318
18914
+
Genic
-252
NZ_LR595897.1
19087
19100
AGCGCG
13
+
2
AGCGCG
UKMR15_RS17795
18937
19173
-
Genic
-150
NZ_LR595897.1
19211
19225
AACGAG
14
-
2
TCTCGT
UKMR15_RS17795
18937
19173
-
Intergenic
-274
NZ_LR595897.1
19525
19537
ATCGC
12
-
2
TGCGA
UKMR15_RS17795
18937
19173
-
Intergenic
-588
NZ_LR595897.1
19542
19554
CCGCG
12
-
2
GCGCG
UKMR15_RS17795
18937
19173
-
Intergenic
-605
NZ_LR595897.1
19571
19584
ACCGC
13
-
2
GCGGT
UKMR15_RS17800
19933
20760
-
Intergenic
349
NZ_LR595897.1
19670
19683
ATCGC
13
-
2
CGATG
UKMR15_RS17800
19933
20760
-
Intergenic
250
NZ_LR595897.1
20091
20103
AGCGGC
12
+
2
CGGCAG
UKMR15_RS17800
19933
20760
-
Genic
-158
NZ_LR595897.1
20439
20451
AGATCG
12
+
2
ATCGAG
UKMR15_RS17800
19933
20760
-
Genic
-506
NZ_LR595897.1
22174
22186
AACCTC
12
+
2
TCAACC
UKMR15_RS17810
21907
23313
+
Genic
-267
NZ_LR595897.1
23491
23504
AAACGG
13
-
2
CGTTTC
UKMR15_RS17815
23463
23663
+
Genic
-28
NZ_LR595897.1
24658
24671
CG
13
+
6
CG
UKMR15_RS17820
23837
24688
+
Genic
-821
NZ_LR595897.1
26576
26588
ACCAGG
12
+
2
CAGGAC
UKMR15_RS17830
25515
27458
+
Genic
-1061
NZ_LR595897.1
26795
26807
AATAGT
12
-
2
TACTAT
UKMR15_RS17830
25515
27458
+
Genic
-1280
NZ_LR595897.1
30000
30012
AGATCG
12
-
2
TCGATC
UKMR15_RS17845
29361
30254
+
Genic
-639
NZ_LR595897.1
30151
30163
ACATCG
12
+
2
CATCGA
UKMR15_RS17845
29361
30254
+
Genic
-790