Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5601 to 5625 repeats of 10659
Go To:
<<
<
223
224
225
226
227
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3791251
3791263
AGCGCC
12
-
2
TGGCGC
UKMR15_RS16775
3790521
3792416
+
Genic
-730
NZ_LR595896.1
3792136
3792148
ACG
12
+
4
CGA
UKMR15_RS16775
3790521
3792416
+
Genic
-1615
NZ_LR595896.1
3794555
3794570
ATCGGC
15
-
2
CGATGC
UKMR15_RS16785
3794116
3795030
+
Genic
-439
NZ_LR595896.1
3797450
3797464
ATC
14
-
4
GAT
UKMR15_RS16790
3795030
3798680
+
Genic
-2420
NZ_LR595896.1
3797664
3797676
ACGCCT
12
+
2
CCTACG
UKMR15_RS16790
3795030
3798680
+
Genic
-2634
NZ_LR595896.1
3802157
3802170
AAGCCC
13
+
2
GCCCAA
UKMR15_RS16810
3801138
3802148
-
Intergenic
-1019
NZ_LR595896.1
3802733
3802745
ACGCGC
12
-
2
GTGCGC
UKMR15_RS16815
3802787
3803038
+
Intergenic
42
NZ_LR595896.1
3804119
3804134
CCGGCG
15
+
2
CCGGCG
UKMR15_RS16835
3804067
3804867
-
Genic
-52
NZ_LR595896.1
3804623
3804635
AACGTG
12
-
2
TCACGT
UKMR15_RS16835
3804067
3804867
-
Genic
-556
NZ_LR595896.1
3805062
3805075
AGCGCG
13
-
2
CTCGCG
UKMR15_RS16840
3804886
3805464
-
Genic
-176
NZ_LR595896.1
3805121
3805133
ACGAGC
12
+
2
CGAGCA
UKMR15_RS16840
3804886
3805464
-
Genic
-235
NZ_LR595896.1
3805249
3805261
AGCGCG
12
-
2
CGCTCG
UKMR15_RS16840
3804886
3805464
-
Genic
-363
NZ_LR595896.1
3805809
3805821
AGCGCG
12
-
2
TCGCGC
UKMR15_RS16845
3805587
3806021
-
Genic
-222
NZ_LR595896.1
3805964
3805976
CCGCG
12
-
2
GCGCG
UKMR15_RS16845
3805587
3806021
-
Genic
-377
NZ_LR595896.1
3806088
3806100
AGGCGC
12
+
2
GCGCAG
rsmI
3806068
3806955
+
Genic
-20
NZ_LR595896.1
3806447
3806459
CCGCGG
12
+
2
CGCGGC
rsmI
3806068
3806955
+
Genic
-379
NZ_LR595896.1
3806516
3806530
AAGCCG
14
+
2
GCCGAA
rsmI
3806068
3806955
+
Genic
-448
NZ_LR595896.1
3806799
3806811
AAGACG
12
+
2
GACGAA
rsmI
3806068
3806955
+
Genic
-731
NZ_LR595896.1
3811883
3811896
ACCGAG
13
+
2
GACCGA
UKMR15_RS16880
3811741
3812034
-
Genic
-142
NZ_LR595896.1
3814285
3814297
AGCGCG
12
+
2
GCGCGA
UKMR15_RS16890
3813412
3814620
+
Genic
-873
NZ_LR595896.1
3814322
3814334
AGCGCG
12
-
2
CGCGCT
UKMR15_RS16890
3813412
3814620
+
Genic
-910
NZ_LR595896.1
3814374
3814387
AGGCCG
13
-
2
GGCCTC
UKMR15_RS16890
3813412
3814620
+
Genic
-962
NZ_LR595896.1
3814409
3814421
CCG
12
+
4
CGC
UKMR15_RS16890
3813412
3814620
+
Genic
-997
NZ_LR595896.1
3815369
3815382
AAGGCG
13
-
2
CGCCTT
UKMR15_RS16895
3814809
3815951
-
Genic
-560
NZ_LR595896.1
3816807
3816821
AGCGCG
14
+
2
CGAGCG
UKMR15_RS16900
3816407
3817507
-
Genic
-400