Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5451 to 5475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3655944
3655957
AGATCC
13
-
2
GATCTG
UKMR15_RS16145
3654235
3658938
-
Genic
-1709
NZ_LR595896.1
3656188
3656201
ATCGCG
13
+
2
ATCGCG
UKMR15_RS16145
3654235
3658938
-
Genic
-1953
NZ_LR595896.1
3657301
3657313
ATCCG
12
-
2
CGGAT
UKMR15_RS16145
3654235
3658938
-
Genic
-3066
NZ_LR595896.1
3657365
3657379
AACAAG
14
-
2
TCTTGT
UKMR15_RS16145
3654235
3658938
-
Genic
-3130
NZ_LR595896.1
3657604
3657616
AACGCG
12
-
2
TTCGCG
UKMR15_RS16145
3654235
3658938
-
Genic
-3369
NZ_LR595896.1
3657949
3657962
ATC
13
+
4
ATC
UKMR15_RS16145
3654235
3658938
-
Genic
-3714
NZ_LR595896.1
3658226
3658239
AGCGCG
13
+
2
CGAGCG
UKMR15_RS16145
3654235
3658938
-
Genic
-3991
NZ_LR595896.1
3658358
3658372
AAGCTC
14
-
2
GCTTGA
UKMR15_RS16145
3654235
3658938
-
Genic
-4123
NZ_LR595896.1
3661716
3661728
CCG
12
+
4
CGC
ugpQ
3661013
3661774
-
Genic
-703
NZ_LR595896.1
3662278
3662290
ACGATC
12
+
2
ATCACG
UKMR15_RS16165
3661819
3662901
-
Genic
-459
NZ_LR595896.1
3663296
3663309
ACGGCG
13
-
2
GTCGCC
ugpE
3662927
3663772
-
Genic
-369
NZ_LR595896.1
3664025
3664037
AGCGGC
12
+
2
GCAGCG
ugpA
3663769
3664653
-
Genic
-256
NZ_LR595896.1
3667270
3667282
AGCGCG
12
+
2
GCGCGA
UKMR15_RS16185
3666194
3667426
-
Genic
-1076
NZ_LR595896.1
3669229
3669242
AGCGC
13
-
2
CGCTG
pilQ
3669186
3670922
-
Genic
-43
NZ_LR595896.1
3669449
3669462
AGATCG
13
+
2
ATCGAG
pilQ
3669186
3670922
-
Genic
-263
NZ_LR595896.1
3670123
3670135
ATGCGC
12
+
2
GCGCAT
pilQ
3669186
3670922
-
Genic
-937
NZ_LR595896.1
3670145
3670158
AGCGCG
13
-
2
GCGCTC
pilQ
3669186
3670922
-
Genic
-959
NZ_LR595896.1
3670193
3670206
CCGCG
13
+
2
GCCGC
pilQ
3669186
3670922
-
Genic
-1007
NZ_LR595896.1
3670414
3670429
ACCGGC
15
-
2
CGGTGC
pilQ
3669186
3670922
-
Genic
-1228
NZ_LR595896.1
3670739
3670751
AATCG
12
+
2
CGAAT
pilQ
3669186
3670922
-
Genic
-1553
NZ_LR595896.1
3671139
3671151
ATCGGC
12
+
2
GCATCG
UKMR15_RS16205
3670919
3671812
-
Genic
-220
NZ_LR595896.1
3672348
3672361
AGCGCG
13
-
2
GCGCTC
UKMR15_RS16210
3671875
3672555
-
Genic
-473
NZ_LR595896.1
3672524
3672536
ACCGC
12
+
2
GCACC
UKMR15_RS16210
3671875
3672555
-
Genic
-649
NZ_LR595896.1
3673319
3673331
ACGCCG
12
-
2
GTCGGC
pilM
3672552
3673499
-
Genic
-767
NZ_LR595896.1
3674159
3674171
ACGATC
12
+
2
CACGAT
UKMR15_RS16220
3673741
3676134
+
Genic
-418