Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5401 to 5425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3622007
3622019
ACGATC
12
+
2
CGATCA
UKMR15_RS15955
3621598
3622980
-
Genic
-409
NZ_LR595896.1
3622748
3622760
AACGCG
12
+
2
ACGCGA
UKMR15_RS15955
3621598
3622980
-
Genic
-1150
NZ_LR595896.1
3622816
3622829
ACGAGC
13
+
2
ACGAGC
UKMR15_RS15955
3621598
3622980
-
Genic
-1218
NZ_LR595896.1
3625700
3625712
AAGGGC
12
+
2
GCAAGG
UKMR15_RS15970
3624590
3625798
+
Genic
-1110
NZ_LR595896.1
3625743
3625756
CCG
13
+
4
GCC
UKMR15_RS15970
3624590
3625798
+
Genic
-1153
NZ_LR595896.1
3628689
3628701
AGCGCG
12
-
2
CTCGCG
UKMR15_RS16000
3628675
3629043
-
Genic
-14
NZ_LR595896.1
3629271
3629283
AGCGCG
12
+
2
CGCGAG
hisI
3629040
3629453
-
Genic
-231
NZ_LR595896.1
3629618
3629631
ACCGGC
13
+
2
GGCACC
hisF
3629453
3630226
-
Genic
-165
NZ_LR595896.1
3632028
3632040
AGCGCG
12
+
2
GAGCGC
UKMR15_RS16025
3631870
3632490
-
Genic
-158
NZ_LR595896.1
3632054
3632066
AGCCCG
12
+
2
CGAGCC
UKMR15_RS16025
3631870
3632490
-
Genic
-184
NZ_LR595896.1
3633520
3633532
AACGTG
12
-
2
CACGTT
UKMR15_RS16035
3633197
3634267
-
Genic
-323
NZ_LR595896.1
3634080
3634092
CCGCG
12
-
2
GGCGC
UKMR15_RS16035
3633197
3634267
-
Genic
-883
NZ_LR595896.1
3635919
3635933
ACCTCG
14
+
2
CCTCGA
UKMR15_RS16045
3635801
3636457
-
Genic
-118
NZ_LR595896.1
3636206
3636218
CCG
12
+
4
CCG
UKMR15_RS16045
3635801
3636457
-
Genic
-405
NZ_LR595896.1
3637718
3637731
ACGCGC
13
-
2
CGTGCG
murA
3636454
3637803
-
Genic
-1264
NZ_LR595896.1
3638965
3638978
AGATCG
13
-
2
GATCTC
UKMR15_RS16065
3638894
3639820
-
Genic
-71
NZ_LR595896.1
3639323
3639335
ACGTCG
12
+
2
TCGACG
UKMR15_RS16065
3638894
3639820
-
Genic
-429
NZ_LR595896.1
3639591
3639604
CCGCG
13
+
2
CGCGC
UKMR15_RS16065
3638894
3639820
-
Genic
-697
NZ_LR595896.1
3640022
3640035
CCCGG
13
+
2
GCCCG
UKMR15_RS16070
3640116
3640385
-
Intergenic
81
NZ_LR595896.1
3640207
3640221
CG
14
+
7
CG
UKMR15_RS16070
3640116
3640385
-
Genic
-91
NZ_LR595896.1
3640621
3640633
ACGCCG
12
-
2
GGCGTC
UKMR15_RS16075
3640382
3641014
-
Genic
-239
NZ_LR595896.1
3640732
3640744
AGC
12
-
4
CTG
UKMR15_RS16075
3640382
3641014
-
Genic
-350
NZ_LR595896.1
3643822
3643834
AGCGCG
12
+
2
GCGCGA
UKMR15_RS16095
3643473
3644291
-
Genic
-349
NZ_LR595896.1
3644613
3644625
ACCGCG
12
-
2
GTCGCG
thiE
3644391
3645494
-
Genic
-222
NZ_LR595896.1
3645091
3645103
ACGGCG
12
-
2
CGTCGC
thiE
3644391
3645494
-
Genic
-700