Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5326 to 5350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3555840
3555852
ACGCGG
12
-
2
CGCGTC
UKMR15_RS15660
3553787
3556048
+
Genic
-2053
NZ_LR595896.1
3556085
3556098
AGCGCG
13
-
2
CGCGCT
UKMR15_RS15665
3556045
3557493
+
Genic
-40
NZ_LR595896.1
3556679
3556692
AAGGCG
13
+
2
GGCGAA
UKMR15_RS15665
3556045
3557493
+
Genic
-634
NZ_LR595896.1
3556697
3556710
CCGGCG
13
+
2
CGCCGG
UKMR15_RS15665
3556045
3557493
+
Genic
-652
NZ_LR595896.1
3557509
3557523
AAGGCG
14
+
2
AAGGCG
UKMR15_RS15665
3556045
3557493
+
Intergenic
-1464
NZ_LR595896.1
3557528
3557541
AGCGCG
13
-
2
CTCGCG
UKMR15_RS15665
3556045
3557493
+
Intergenic
-1483
NZ_LR595896.1
3558414
3558426
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15670
3557703
3558671
-
Genic
-711
NZ_LR595896.1
3558642
3558655
AATTCG
13
+
2
TTCGAA
UKMR15_RS15670
3557703
3558671
-
Genic
-939
NZ_LR595896.1
3558824
3558837
ACGGCG
13
-
2
TCGCCG
UKMR15_RS15675
3558797
3559648
+
Genic
-27
NZ_LR595896.1
3559176
3559193
AGCGGC
17
-
2
GCCGCT
UKMR15_RS15675
3558797
3559648
+
Genic
-379
NZ_LR595896.1
3560055
3560069
AGCGCG
14
-
2
TCGCGC
tssM
3559920
3563813
+
Genic
-135
NZ_LR595896.1
3561269
3561288
AGCGCG
19
-
3
GCGCTC
tssM
3559920
3563813
+
Genic
-1349
NZ_LR595896.1
3562783
3562796
CCCCGG
13
+
2
CCCCGG
tssM
3559920
3563813
+
Genic
-2863
NZ_LR595896.1
3563069
3563082
CCCGCG
13
-
2
GCGGGC
tssM
3559920
3563813
+
Genic
-3149
NZ_LR595896.1
3563349
3563361
ATCGCG
12
+
2
CGATCG
tssM
3559920
3563813
+
Genic
-3429
NZ_LR595896.1
3563584
3563597
ACGCTG
13
-
2
CAGCGT
tssM
3559920
3563813
+
Genic
-3664
NZ_LR595896.1
3563673
3563685
AGGCGC
12
-
2
GCCTGC
tssM
3559920
3563813
+
Genic
-3753
NZ_LR595896.1
3563750
3563762
CCGCGG
12
+
2
GCCGCG
tssM
3559920
3563813
+
Genic
-3830
NZ_LR595896.1
3564443
3564457
AGCGGC
14
-
2
CGCTGC
tagF
3563810
3564799
+
Genic
-633
NZ_LR595896.1
3564564
3564576
AGCGCG
12
+
2
CGAGCG
tagF
3563810
3564799
+
Genic
-754
NZ_LR595896.1
3564653
3564667
ACATCG
14
+
2
ACATCG
tagF
3563810
3564799
+
Genic
-843
NZ_LR595896.1
3564843
3564859
AGCGCG
16
-
2
TCGCGC
UKMR15_RS15695
3564804
3565736
+
Genic
-39
NZ_LR595896.1
3564859
3564873
AGCGCG
14
-
2
CGCGCT
UKMR15_RS15695
3564804
3565736
+
Genic
-55
NZ_LR595896.1
3564998
3565010
CCCGCG
12
-
2
GGCGCG
UKMR15_RS15695
3564804
3565736
+
Genic
-194
NZ_LR595896.1
3566166
3566179
CCCGCG
13
-
2
GGCGCG
tssA
3565935
3567056
-
Genic
-231