Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5276 to 5300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3524026
3524038
AAGCCG
12
+
2
CGAAGC
ettA
3522400
3524067
+
Genic
-1626
NZ_LR595896.1
3524359
3524374
CCGCG
15
+
3
CGCGC
UKMR15_RS15520
3524398
3525021
-
Intergenic
24
NZ_LR595896.1
3524475
3524490
CCGCGG
15
+
2
CGCGGC
UKMR15_RS15520
3524398
3525021
-
Genic
-77
NZ_LR595896.1
3525335
3525348
ACGCCG
13
-
2
GTCGGC
UKMR15_RS15525
3525018
3525569
-
Genic
-317
NZ_LR595896.1
3525637
3525652
ACGCCG
15
-
2
TCGGCG
UKMR15_RS15530
3525701
3527515
-
Intergenic
49
NZ_LR595896.1
3525856
3525868
ACGCTC
12
-
2
GAGCGT
UKMR15_RS15530
3525701
3527515
-
Genic
-155
NZ_LR595896.1
3526083
3526095
ACGGC
12
-
2
CCGTG
UKMR15_RS15530
3525701
3527515
-
Genic
-382
NZ_LR595896.1
3526430
3526442
CG
12
+
6
CG
UKMR15_RS15530
3525701
3527515
-
Genic
-729
NZ_LR595896.1
3527063
3527075
AGATCG
12
+
2
AGATCG
UKMR15_RS15530
3525701
3527515
-
Genic
-1362
NZ_LR595896.1
3527678
3527690
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15535
3527534
3527788
-
Genic
-144
NZ_LR595896.1
3528704
3528716
ACGCG
12
-
2
TCGCG
UKMR15_RS15540
3528388
3529686
+
Genic
-316
NZ_LR595896.1
3530440
3530452
CCCGCG
12
-
2
CGGGCG
prfA
3529753
3530835
+
Genic
-687
NZ_LR595896.1
3531030
3531043
CG
13
+
6
CG
prmC
3530879
3531736
+
Genic
-151
NZ_LR595896.1
3531203
3531215
ATCGC
12
+
2
GCATC
prmC
3530879
3531736
+
Genic
-324
NZ_LR595896.1
3531973
3531985
AAGACG
12
+
2
CGAAGA
grxD
3531816
3532124
+
Genic
-157
NZ_LR595896.1
3532798
3532810
AGCCGG
12
-
2
GCTCCG
UKMR15_RS15560
3532139
3532735
+
Intergenic
-659
NZ_LR595896.1
3533120
3533132
CCGCGG
12
+
2
GCCGCG
UKMR15_RS15565
3533020
3533808
+
Genic
-100
NZ_LR595896.1
3533890
3533912
AGCCCT
22
-
3
GGCTAG
UKMR15_RS15565
3533020
3533808
+
Intergenic
-870
NZ_LR595896.1
3534617
3534629
AACGCG
12
+
2
CGAACG
UKMR15_RS15570
3534256
3535857
-
Genic
-361
NZ_LR595896.1
3534928
3534940
ACCGGC
12
-
2
GTGCCG
UKMR15_RS15570
3534256
3535857
-
Genic
-672
NZ_LR595896.1
3534984
3534996
AACCTG
12
-
2
GTTCAG
UKMR15_RS15570
3534256
3535857
-
Genic
-728
NZ_LR595896.1
3535536
3535548
AGGCGG
12
-
2
CGCCTC
UKMR15_RS15570
3534256
3535857
-
Genic
-1280
NZ_LR595896.1
3537398
3537410
ACGAGC
12
+
2
ACGAGC
UKMR15_RS15580
3536681
3537943
-
Genic
-717
NZ_LR595896.1
3538358
3538371
ACGCAT
13
+
2
CGCATA
UKMR15_RS15585
3538650
3539255
-
Intergenic
279
NZ_LR595896.1
3538731
3538743
AGCGCG
12
-
2
TCGCGC
UKMR15_RS15585
3538650
3539255
-
Genic
-81