Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5076 to 5100 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3380925
3380939
AAATCG
14
-
2
TCGATT
UKMR15_RS14850
3380502
3381194
+
Genic
-423
NZ_LR595896.1
3381225
3381237
ACGGGC
12
+
2
GCACGG
UKMR15_RS14850
3380502
3381194
+
Intergenic
-723
NZ_LR595896.1
3381756
3381768
AGGCGC
12
-
2
TGCGCC
cynR
3381822
3382757
-
Intergenic
54
NZ_LR595896.1
3382255
3382267
AGCGCG
12
+
2
CGAGCG
cynR
3381822
3382757
-
Genic
-433
NZ_LR595896.1
3383120
3383132
ACCGCC
12
-
2
GCGGTG
UKMR15_RS14860
3382872
3383531
+
Genic
-248
NZ_LR595896.1
3383556
3383568
CCGCG
12
-
2
CGGCG
UKMR15_RS14860
3382872
3383531
+
Intergenic
-684
NZ_LR595896.1
3384923
3384937
AGCGC
14
-
2
GCGCT
UKMR15_RS14870
3384276
3385475
+
Genic
-647
NZ_LR595896.1
3385638
3385650
ACGCGC
12
+
2
GCACGC
UKMR15_RS14870
3384276
3385475
+
Intergenic
-1362
NZ_LR595896.1
3385886
3385898
AACGCG
12
-
2
TTCGCG
gap
3385883
3386893
-
Genic
-3
NZ_LR595896.1
3388300
3388312
AAGGCG
12
-
2
CTTCGC
tkt
3386984
3389056
-
Genic
-1316
NZ_LR595896.1
3388469
3388481
AAGCTC
12
-
2
TTGAGC
tkt
3386984
3389056
-
Genic
-1485
NZ_LR595896.1
3388819
3388832
ACCGCG
13
-
2
GCGGTC
tkt
3386984
3389056
-
Genic
-1835
NZ_LR595896.1
3390714
3390726
AGCGCG
12
-
2
CGCGCT
UKMR15_RS14895
3390584
3391351
+
Genic
-130
NZ_LR595896.1
3391240
3391253
AGCGCG
13
+
2
GCGCGA
UKMR15_RS14895
3390584
3391351
+
Genic
-656
NZ_LR595896.1
3391478
3391491
CCGCG
13
-
2
GCGGC
UKMR15_RS14895
3390584
3391351
+
Intergenic
-894
NZ_LR595896.1
3394514
3394526
AGCGCG
12
+
2
CGCGAG
UKMR15_RS14910
3393090
3395399
-
Genic
-1424
NZ_LR595896.1
3394780
3394795
CCCGCG
15
+
2
CCGCGC
UKMR15_RS14910
3393090
3395399
-
Genic
-1690
NZ_LR595896.1
3395132
3395144
AGGCCG
12
+
2
GCCGAG
UKMR15_RS14910
3393090
3395399
-
Genic
-2042
NZ_LR595896.1
3395233
3395245
AACGCG
12
+
2
ACGCGA
UKMR15_RS14910
3393090
3395399
-
Genic
-2143
NZ_LR595896.1
3395850
3395864
CCGCG
14
+
2
GCGCC
thiL
3395601
3396602
+
Genic
-249
NZ_LR595896.1
3395893
3395906
ACGCCG
13
+
2
CGCCGA
thiL
3395601
3396602
+
Genic
-292
NZ_LR595896.1
3396060
3396072
ACGGCG
12
+
2
GCGACG
thiL
3395601
3396602
+
Genic
-459
NZ_LR595896.1
3397570
3397582
CCCGG
12
-
2
GCCGG
UKMR15_RS14925
3397253
3397753
+
Genic
-317
NZ_LR595896.1
3398487
3398499
ACCGTG
12
+
2
TGACCG
pyrF
3398036
3398863
-
Genic
-451
NZ_LR595896.1
3398940
3398952
CCGGCG
12
+
2
GCCGGC
UKMR15_RS14935
3398960
3400033
-
Intergenic
8