Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5026 to 5050 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
3346455
3346469
AGGCGC
14
-
2
GCCTGC
pyrC
3345573
3346631
-
Genic
-882
NZ_LR595896.1
3347978
3347990
ATCGCG
12
+
2
TCGCGA
UKMR15_RS14685
3348198
3348446
-
Intergenic
208
NZ_LR595896.1
3349063
3349075
AGCCGC
12
+
2
GCCGCA
UKMR15_RS14690
3348903
3349322
-
Genic
-160
NZ_LR595896.1
3350745
3350757
CCCGCG
12
+
2
GCGCCC
UKMR15_RS14700
3350291
3350608
+
Intergenic
-454
NZ_LR595896.1
3351876
3351888
AGCCCG
12
+
2
GCCCGA
UKMR15_RS14710
3351268
3351993
-
Genic
-608
NZ_LR595896.1
3353747
3353759
AAGGCG
12
-
2
CTTCGC
UKMR15_RS14725
3353490
3354383
-
Genic
-257
NZ_LR595896.1
3357885
3357897
ACCGGC
12
-
2
CGGTGC
UKMR15_RS14740
3357720
3359126
+
Genic
-165
NZ_LR595896.1
3358242
3358254
AGCGGC
12
-
2
CGCTGC
UKMR15_RS14740
3357720
3359126
+
Genic
-522
NZ_LR595896.1
3358416
3358428
AGC
12
-
4
TGC
UKMR15_RS14740
3357720
3359126
+
Genic
-696
NZ_LR595896.1
3358736
3358748
AACGCG
12
-
2
TTCGCG
UKMR15_RS14740
3357720
3359126
+
Genic
-1016
NZ_LR595896.1
3359100
3359113
CCGCG
13
-
2
GCGGC
UKMR15_RS14740
3357720
3359126
+
Genic
-1380
NZ_LR595896.1
3359570
3359582
AGCTCG
12
+
2
TCGAGC
purB
3359234
3360622
+
Genic
-336
NZ_LR595896.1
3359711
3359723
AGCGCG
12
-
2
TCGCGC
purB
3359234
3360622
+
Genic
-477
NZ_LR595896.1
3359718
3359733
ACGCGC
15
+
2
CGCGCA
purB
3359234
3360622
+
Genic
-484
NZ_LR595896.1
3360055
3360068
ACCTCG
13
+
2
CTCGAC
purB
3359234
3360622
+
Genic
-821
NZ_LR595896.1
3361430
3361444
AGCCCG
14
+
2
CGAGCC
UKMR15_RS14755
3361275
3362636
-
Genic
-155
NZ_LR595896.1
3361447
3361459
ACGAGC
12
+
2
CGAGCA
UKMR15_RS14755
3361275
3362636
-
Genic
-172
NZ_LR595896.1
3361608
3361620
ACCGCG
12
-
2
GTCGCG
UKMR15_RS14755
3361275
3362636
-
Genic
-333
NZ_LR595896.1
3362582
3362595
ATCGCG
13
+
2
CGCGAT
UKMR15_RS14755
3361275
3362636
-
Genic
-1307
NZ_LR595896.1
3363279
3363292
ACGCCG
13
+
2
GCCGAC
eda
3362857
3363483
-
Genic
-422
NZ_LR595896.1
3364692
3364705
ACGGCC
13
-
2
GCCGTG
UKMR15_RS14765
3363505
3365358
-
Genic
-1187
NZ_LR595896.1
3365726
3365739
CCGCG
13
+
2
CGCCG
UKMR15_RS14775
3365656
3366654
+
Genic
-70
NZ_LR595896.1
3366847
3366952
AAGCAG
105
-
17
CTTCTG
UKMR15_RS14780
3366792
3367046
-
Genic
-55
NZ_LR595896.1
3366969
3367005
AAGCCG
36
-
6
GCTTCG
UKMR15_RS14780
3366792
3367046
-
Genic
-177
NZ_LR595896.1
3367402
3367416
AGGGGC
14
-
2
CCCTGC
UKMR15_RS14785
3367216
3367638
-
Genic
-186