Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 526 to 550 repeats of 10659
Go To:
<<
<
20
21
22
23
24
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
329588
329600
CCCGCG
12
-
2
CGGGCG
UKMR15_RS01560
329536
330369
+
Genic
-52
NZ_LR595896.1
330294
330307
AGCGCG
13
+
2
CGCGAG
UKMR15_RS01560
329536
330369
+
Genic
-758
NZ_LR595896.1
330626
330638
AACGC
12
-
2
GCGTT
UKMR15_RS01565
330733
331341
-
Intergenic
95
NZ_LR595896.1
330658
330670
ACGCGC
12
-
2
GCGCGT
UKMR15_RS01565
330733
331341
-
Intergenic
63
NZ_LR595896.1
331693
331705
ACGATC
12
+
2
ACGATC
UKMR15_RS01570
331354
334197
-
Genic
-339
NZ_LR595896.1
332933
332945
AACGTC
12
-
2
TGACGT
UKMR15_RS01570
331354
334197
-
Genic
-1579
NZ_LR595896.1
334553
334565
AATGG
12
+
2
GAATG
UKMR15_RS01570
331354
334197
-
Intergenic
-3199
NZ_LR595896.1
335748
335761
AGCGC
13
+
2
GCGCA
dapA
335152
336048
-
Genic
-596
NZ_LR595896.1
335764
335776
ACGCGC
12
-
2
GCGCGT
dapA
335152
336048
-
Genic
-612
NZ_LR595896.1
336244
336256
ACAGCG
12
+
2
CAGCGA
UKMR15_RS01580
336179
336280
-
Genic
-65
NZ_LR595896.1
339229
339241
ACGCCG
12
-
2
TCGGCG
UKMR15_RS01595
339167
339508
+
Genic
-62
NZ_LR595896.1
339716
339728
AGGCCG
12
+
2
GCCGAG
UKMR15_RS01600
339648
339878
+
Genic
-68
NZ_LR595896.1
341072
341087
CCGCG
15
+
3
CGCGC
UKMR15_RS01605
340295
341308
+
Genic
-777
NZ_LR595896.1
342229
342241
AGCCG
12
-
2
CGGCT
UKMR15_RS01605
340295
341308
+
Intergenic
-1934
NZ_LR595896.1
342534
342551
AGCGCG
17
-
2
GCTCGC
UKMR15_RS01615
343573
343977
+
Intergenic
1022
NZ_LR595896.1
342681
342694
ACGGCG
13
-
2
GTCGCC
UKMR15_RS01615
343573
343977
+
Intergenic
879
NZ_LR595896.1
343741
343757
AGGCCG
16
-
2
CGGCCT
UKMR15_RS01615
343573
343977
+
Genic
-168
NZ_LR595896.1
343852
343865
AGGCGC
13
+
2
AGGCGC
UKMR15_RS01615
343573
343977
+
Genic
-279
NZ_LR595896.1
345099
345111
CCCGCG
12
-
2
GCGCGG
UKMR15_RS01620
344091
345092
+
Intergenic
-1008
NZ_LR595896.1
347171
347183
CCG
12
+
4
CGC
UKMR15_RS01625
345309
348884
+
Genic
-1862
NZ_LR595896.1
348250
348262
CCGCG
12
-
2
CGGCG
UKMR15_RS01625
345309
348884
+
Genic
-2941
NZ_LR595896.1
348471
348484
CCGCG
13
+
2
GCGCC
UKMR15_RS01625
345309
348884
+
Genic
-3162
NZ_LR595896.1
349580
349592
AGCGGC
12
+
2
GCAGCG
UKMR15_RS01630
349168
350835
-
Genic
-412
NZ_LR595896.1
350980
350993
CCCGCG
13
+
2
GCGCCC
UKMR15_RS01630
349168
350835
-
Intergenic
-1812
NZ_LR595896.1
353208
353220
AACAGG
12
-
2
CTGTTC
UKMR15_RS01640
352891
353271
+
Genic
-317