Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 501 to 525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
310016
310028
AGCGG
12
+
2
AGCGG
UKMR15_RS01455
310279
311319
-
Intergenic
251
NZ_LR595896.1
311273
311285
AGCGCG
12
+
2
CGAGCG
UKMR15_RS01455
310279
311319
-
Genic
-994
NZ_LR595896.1
312112
312124
CCGGCG
12
+
2
GCGCCG
UKMR15_RS01460
311702
312178
+
Genic
-410
NZ_LR595896.1
312180
312192
CCCGG
12
-
2
GCCGG
UKMR15_RS01460
311702
312178
+
Intergenic
-478
NZ_LR595896.1
312664
312676
CG
12
+
6
GC
UKMR15_RS01465
312586
313662
+
Genic
-78
NZ_LR595896.1
313046
313059
AGGCCG
13
-
2
CCTCGG
UKMR15_RS01465
312586
313662
+
Genic
-460
NZ_LR595896.1
315224
315239
CCGCG
15
+
3
CGCGC
UKMR15_RS01475
315239
316198
-
Genic
0
NZ_LR595896.1
315367
315379
AAGGCG
12
-
2
CGCCTT
UKMR15_RS01475
315239
316198
-
Genic
-128
NZ_LR595896.1
315729
315743
CCCGCG
14
+
2
CGCCCG
UKMR15_RS01475
315239
316198
-
Genic
-490
NZ_LR595896.1
316246
316258
ACGCG
12
-
2
CGTCG
UKMR15_RS01475
315239
316198
-
Intergenic
-1007
NZ_LR595896.1
317145
317157
AGATCG
12
-
2
TCGATC
UKMR15_RS01480
316494
317387
+
Genic
-651
NZ_LR595896.1
318660
318674
AGCGCG
14
-
2
GCTCGC
UKMR15_RS01490
318068
318982
+
Genic
-592
NZ_LR595896.1
318893
318905
CCGCG
12
-
2
GCGGC
UKMR15_RS01490
318068
318982
+
Genic
-825
NZ_LR595896.1
320785
320798
AACGCG
13
-
2
GCGTTC
UKMR15_RS01500
320581
320913
-
Genic
-204
NZ_LR595896.1
322500
322514
ATCGCG
14
+
2
CGCGAT
UKMR15_RS01515
322493
323434
-
Genic
-7
NZ_LR595896.1
322612
322624
ACGATC
12
-
2
CGTGAT
UKMR15_RS01515
322493
323434
-
Genic
-119
NZ_LR595896.1
322997
323009
AGCCCG
12
+
2
CCGAGC
UKMR15_RS01515
322493
323434
-
Genic
-504
NZ_LR595896.1
323732
323746
AAATCG
14
+
2
GAAATC
UKMR15_RS01520
323439
323876
-
Genic
-293
NZ_LR595896.1
323919
323932
CCGCG
13
+
2
CGCGC
UKMR15_RS01520
323439
323876
-
Intergenic
-480
NZ_LR595896.1
324351
324364
AACGCG
13
-
2
GTTCGC
UKMR15_RS01525
324026
324655
+
Genic
-325
NZ_LR595896.1
325010
325023
AAGCGC
13
-
2
GCGCTT
UKMR15_RS01530
324684
325094
-
Genic
-326
NZ_LR595896.1
325886
325898
CCCGCG
12
-
2
GCGGGC
UKMR15_RS01535
325232
327349
-
Genic
-654
NZ_LR595896.1
326234
326246
ACCGTG
12
-
2
ACGGTC
UKMR15_RS01535
325232
327349
-
Genic
-1002
NZ_LR595896.1
327284
327296
CCG
12
-
4
GCG
UKMR15_RS01535
325232
327349
-
Genic
-2052
NZ_LR595896.1
327497
327512
AGCGCG
15
-
2
CGCGCT
UKMR15_RS01535
325232
327349
-
Intergenic
-2265