Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 451 to 475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
285658
285670
ACGCGC
12
-
2
TGCGCG
UKMR15_RS01345
283080
285608
-
Intergenic
-2578
NZ_LR595896.1
286790
286803
CCCGCG
13
+
2
CCGCGC
UKMR15_RS01350
286157
286831
+
Genic
-633
NZ_LR595896.1
287329
287341
CG
12
+
6
CG
UKMR15_RS01355
286828
287676
+
Genic
-501
NZ_LR595896.1
287626
287642
CCG
16
-
5
GCG
UKMR15_RS01355
286828
287676
+
Genic
-798
NZ_LR595896.1
287645
287659
CCG
14
-
4
CGG
UKMR15_RS01355
286828
287676
+
Genic
-817
NZ_LR595896.1
288180
288192
CCGCG
12
-
2
GCGGC
UKMR15_RS01360
287676
288173
+
Intergenic
-504
NZ_LR595896.1
288864
288876
CCG
12
+
4
CGC
UKMR15_RS01370
288782
290083
+
Genic
-82
NZ_LR595896.1
289097
289109
ATCGGC
12
+
2
GCATCG
UKMR15_RS01370
288782
290083
+
Genic
-315
NZ_LR595896.1
289582
289595
ACGCCG
13
+
2
GCCGAC
UKMR15_RS01370
288782
290083
+
Genic
-800
NZ_LR595896.1
289925
289939
CCCGCG
14
-
2
GCGCGG
UKMR15_RS01370
288782
290083
+
Genic
-1143
NZ_LR595896.1
291046
291058
AGCTCG
12
+
2
GCTCGA
UKMR15_RS01375
290094
291674
+
Genic
-952
NZ_LR595896.1
291064
291077
AGCGCG
13
-
2
CGCGCT
UKMR15_RS01375
290094
291674
+
Genic
-970
NZ_LR595896.1
291384
291396
CCGCG
12
-
2
GCGCG
UKMR15_RS01375
290094
291674
+
Genic
-1290
NZ_LR595896.1
291556
291568
CCCGCG
12
+
2
GCCCGC
UKMR15_RS01375
290094
291674
+
Genic
-1462
NZ_LR595896.1
292507
292520
AGGGCG
13
+
2
GGCGAG
UKMR15_RS01380
291671
294883
+
Genic
-836
NZ_LR595896.1
292530
292542
ACGATC
12
-
2
CGTGAT
UKMR15_RS01380
291671
294883
+
Genic
-859
NZ_LR595896.1
292855
292871
ATCGCG
16
+
2
ATCGCG
UKMR15_RS01380
291671
294883
+
Genic
-1184
NZ_LR595896.1
293128
293141
CCG
13
-
4
GCG
UKMR15_RS01380
291671
294883
+
Genic
-1457
NZ_LR595896.1
293295
293307
CCGCGG
12
+
2
CGCGGC
UKMR15_RS01380
291671
294883
+
Genic
-1624
NZ_LR595896.1
295096
295110
ACGATG
14
+
2
CGATGA
UKMR15_RS01385
294880
295221
+
Genic
-216
NZ_LR595896.1
296250
296262
AGCGCG
12
+
2
CGAGCG
glmS
295952
297784
-
Genic
-298
NZ_LR595896.1
296782
296794
ACCGCT
12
-
2
GCGGTA
glmS
295952
297784
-
Genic
-830
NZ_LR595896.1
297182
297197
AGCGCG
15
+
2
GCGAGC
glmS
295952
297784
-
Genic
-1230
NZ_LR595896.1
297480
297494
AGCGCG
14
+
2
CGAGCG
glmS
295952
297784
-
Genic
-1528
NZ_LR595896.1
298947
298959
AGCGGC
12
+
2
GCAGCG
glmU
297848
299209
-
Genic
-1099