Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 426 to 450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
269911
269923
AACCCG
12
-
2
GTTCGG
hpnI
268199
269446
-
Intergenic
-1712
NZ_LR595896.1
270075
270087
CG
12
+
6
CG
hpnI
268199
269446
-
Intergenic
-1876
NZ_LR595896.1
270520
270532
ACGGC
12
-
2
CGTGC
UKMR15_RS01290
271464
271724
-
Intergenic
932
NZ_LR595896.1
270835
270848
AGGCCG
13
-
2
GGCCTC
UKMR15_RS01290
271464
271724
-
Intergenic
616
NZ_LR595896.1
271823
271835
ACGC
12
-
3
TGCG
UKMR15_RS01295
271906
272229
-
Intergenic
71
NZ_LR595896.1
272529
272543
CCG
14
-
4
CGG
UKMR15_RS01300
272757
272897
+
Intergenic
214
NZ_LR595896.1
272600
272612
ACAGTG
12
+
2
GACAGT
UKMR15_RS01300
272757
272897
+
Intergenic
145
NZ_LR595896.1
272638
272651
AAATCG
13
-
2
TTTCGA
UKMR15_RS01300
272757
272897
+
Intergenic
106
NZ_LR595896.1
273281
273293
AGC
12
-
4
GCT
UKMR15_RS01305
273016
274692
+
Genic
-265
NZ_LR595896.1
273857
273869
ATCGCG
12
+
2
CGCGAT
UKMR15_RS01305
273016
274692
+
Genic
-841
NZ_LR595896.1
274651
274663
ACGATC
12
-
2
TCGTGA
UKMR15_RS01305
273016
274692
+
Genic
-1635
NZ_LR595896.1
274716
274728
CCG
12
-
4
GCG
UKMR15_RS01305
273016
274692
+
Intergenic
-1700
NZ_LR595896.1
274901
274913
CCCGCG
12
-
2
CGGGCG
UKMR15_RS01305
273016
274692
+
Intergenic
-1885
NZ_LR595896.1
276915
276928
CCGCG
13
+
2
CGCGC
gor
276985
278346
+
Intergenic
57
NZ_LR595896.1
277784
277798
AGCCCG
14
-
2
CGGGCT
gor
276985
278346
+
Genic
-799
NZ_LR595896.1
278226
278241
ATCGCG
15
+
2
ATCGCG
gor
276985
278346
+
Genic
-1241
NZ_LR595896.1
278546
278559
AACGG
13
-
2
TCCGT
gor
276985
278346
+
Intergenic
-1561
NZ_LR595896.1
280553
280565
AAACGG
12
+
2
AACGGA
UKMR15_RS01330
280573
281076
+
Intergenic
8
NZ_LR595896.1
281042
281056
AGCCGC
14
-
2
GCGGCT
UKMR15_RS01330
280573
281076
+
Genic
-469
NZ_LR595896.1
281322
281334
AGATCG
12
+
2
TCGAGA
UKMR15_RS01335
281184
281891
+
Genic
-138
NZ_LR595896.1
282659
282674
AGCGCG
15
-
2
GCGCTC
UKMR15_RS01340
282261
282461
+
Intergenic
-398
NZ_LR595896.1
283095
283107
AGCCGC
12
+
2
CGCAGC
UKMR15_RS01345
283080
285608
-
Genic
-15
NZ_LR595896.1
283356
283368
ACGGGC
12
-
2
GTGCCC
UKMR15_RS01345
283080
285608
-
Genic
-276
NZ_LR595896.1
285528
285540
ACATCG
12
-
2
GATGTC
UKMR15_RS01345
283080
285608
-
Genic
-2448
NZ_LR595896.1
285580
285592
CCGCG
12
+
2
CGCCG
UKMR15_RS01345
283080
285608
-
Genic
-2500